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首页> 外文期刊>Parasitology Research >Sequence structure and intragenomic variability of ribosomal ITS2 in monozoic tapeworms of the genus Khawia (Cestoda: Caryophyllidea), parasites of cyprinid fish
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Sequence structure and intragenomic variability of ribosomal ITS2 in monozoic tapeworms of the genus Khawia (Cestoda: Caryophyllidea), parasites of cyprinid fish

机译:w鱼寄生虫Khawia(Cestoda:Caryophyllidea)的单生tape虫中核糖体ITS2的序列结构和基因组内变异性

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摘要

The sequence structure of the ribosomal internal transcribed spacer 2 (ITS2) was determined for six species of Khawia (Cestoda: Caryophyllidea), parasites of cyprinid fish in the Holarctic Region. Homologous intragenomic ITS2 structure was found in Khawia armeniaca, Khawia baltica, and Khawia rossittensis; whereas divergent intragenomic ITS2 copies were detected in Chinese, Japanese, and Slovak isolates of Khawia sinensis and in Khawia japonensis, both parasitic in common carp, and in Khawia saurogobii, recently described from Chinese lizard gudgeon in China. Despite distinct morphological differences between K. saurogobii and K. sinensis, both species display very high level of molecular homogeneity. Variation in number of short repetitive motifs [(GCCT)n (GCCC)n], [(GTG)n] , [(ATAC)n], [ACGTGT (TCGTGT)n], [(GT)n], [(GT)n], and [(ACCT)n (GCCT)n] resulted in assortment of ITS2 sequences in four ITS2 variants in K. saurogobii from China, three in Chinese and Japanese isolates of K. sinensis, and five ITS2 variants in K. sinensis from Slovakia. In K. japonensis, the structure and arrangement of microsatellites was different from those of K. sinensis and K. saurogobii. The heterogeneity in the number of two microsatellite regions [(TG)n; (TTG)n] divided ITS2 clones into two variants - first ITS2 variant (472 bp) with (TG)5 and (TTG)6, and second variant with (TG)7 and (TTG)2 (465 bp). Sequence identity of K. saurogobii with all but one (K. sinensis) congeneric species ranged between 49.5 and 69.2 %, which corresponds to the interspecific differences. In contrast, sequence identity of K. saurogobii and K. sinensis (87.6-95.0 %) failed into the range of intraspecific variation determined for K. sinensis samples. This close genetic similarity indicates that recently described K. saurogobii may have undergone morphological divergence as a result of ongoing sympatric speciation by host switching.
机译:核糖体内部转录间隔区2(ITS2)的序列结构确定了6种物种的科威亚(Cesta:Caryophyllidea),在Holarctic地区的鲤科鱼类的寄生虫。同源基因组内ITS2结构在亚美尼亚(Khawia armeniaca),波罗的海(Khawia baltica)和罗氏海藻(Khawia rossittensis)中发现。而最近在中国蜥蜴S鱼中发现的中国,日本和斯洛伐克分离的中华猕猴桃和日本猕猴桃以及日本猕猴桃中分离到的基因组内ITS2拷贝均存在寄生性。尽管Saurogobii和K. sinensis之间在形态上存在明显差异,但这两种物种均显示出很高的分子同质性。短重复基序[(GCCT)n(GCCC) n ],[(GTG) n ],[(ATAC) n ],[ACGTGT(TCGTGT) n ],[(GT) n ],[(GT) n ]和[(ACCT )n(GCCT) n ]导致来自中国鲍氏假单胞菌的四个ITS2变体,中华和日本分离的中华假丝酵母的三个ITS2变种以及中华假丝酵母的五个ITS2变种的ITS2序列分类来自斯洛伐克。 japonensis中的微卫星的结构和排列不同于中华结和saurogobii。两个微卫星区域数量的异质性[(TG)n; (TTG)n]将ITS2克隆分为两个变体-第一个具有(TG)5和(​​TTG)6的ITS2变体(472 bp),第二个具有(TG)7和(TTG)2(465 bp)的变体。除一种外(K. sinensis)的同种外,K。saurogobii的序列同一性在49.5%和69.2%之间,与种间差异相对应。相反,Saurogobii和K. sinensis(87.6-95.0%)的序列同一性未能进入为K. sinensis样品确定的种内变异范围。这种紧密的遗传相似性表明,最近描述的沙巴氏假单胞菌可能由于宿主交换正在进行的同胞形态形成而发生了形态差异。

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