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首页> 外文期刊>Bulletin of the American Museum of Natural History >Phylogenetic analyses of postcranial skeletal morphology in didelphid marsupials
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Phylogenetic analyses of postcranial skeletal morphology in didelphid marsupials

机译:迪德尔菲有袋动物颅后骨骼形态的系统发育分析

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In this study I provide a phylogenetic hypothesis for didelphid Marsupials including a suite of 114 postcranial characters. The postcranial evidence was cladistically analyzed separately and concatenated with a nonmolecular data set previously published (71 cranio-dental-external characters). A combined analysis was done including published IRBP (interphotoreceptor retinoid binding protein, 1158 bp), DMP-1 (dentin matrix protein 1, 1176 bp), and RAG-1 (recombinase-activating gene, 2790 bp) sequences to the nonmolecular data set. In order to compare and evaluate the influence of the inclusion of postcranial morphology to previous hypotheses, the taxon sampling of didelphine ingroup was almost similar to the one used in recent series of papers on didelphid phylogeny. The postcranial information includes 48 characters from the axial skeleton, 37 from the anterior limb, and 29 from the posterior limb. I present anatomical descriptions for each postcranial character, adding details of different conditions observed among didelphine ingroup, as well as some functional implications. Different hypotheses that are discussed as polymorphic characters are alternatively treated as composite entries (CO) and transformation series (TS) in morphological and combined analyses. Different codings of polymorphic postcranial characters produce topologies that in general are not contradictory. The principal difference is the loss of resolution of trees in TS analysis, compared to CO analysis in postcranial evidence, whereas the support values were in general low in both codings. The topology obtained from postcranial evidence supported some already recovered relationships, such as the monophyly of the large opossums (Didelphis, Philander, Chironectes, Lutreolina, and Metachirus), and several polytypic groups such as Didelphis, Monodelphis, Marmosops, Thylamys, Micoureus, and Philander. Additionally, the intermediate position of Hyladelphys between calorumyines and didelphines is kept in CO analysis. The inclusion of the postcranial data set to previous nonmolecular evidence causes little incongruence, although some modifications in the topology and support values were detected. The effect of different codings of polymorphic characters was similar respect to the postcranialonly data set. In this case, the topology obtained with CO analysis was also notably better resolved than TS analysis. Similarly to the postcranial-only analysis, the topologies obtained in the total morphological evidence applying the two kinds of codings are highly congruent, but the TS treatment seemed not to contribute to retention of more phylogenetic information, since the CO analysis was better resolved. The relationships obtained adding the postcranial evidence to published combined data set (i.e., morphology, IRBP, DMP-1, and RAG-1 sequences) were mostly better resolved and supported in the CO coding than the morphological analyses, although the TS coding causes loss of resolution in the strict consensus. In this sense, some strong differences on deep branch topology can be detected depending on the treatment applied to polymorphic entries and partitioned analyses (e.g., phylogenetic condition of the mouse opossums, nodes C and B). Including the postcranial evidence in the total data set, I also recovered the intermediate position of Hyladelphys, but never the distantly related clades recently recovered by the inclusion of RAG-1 sequences (clades B + I in Gruber, K.F., R.S. Voss, and S.A. Jansa. 2007. Base-compositional heterogeneity in the RAG1 locus among didelphid marsupials: implications for phylogenetic inference and the evolution of GC content. Systematic Biology 56: 1-14). However, the position of Metachirus nudicaudatus and Tlacuatzin canescens is highly affected.
机译:在这项研究中,我为双足有袋动物提供了系统发育假设,其中包括一组114个颅后特征。对颅后证据分别进行了共阴分析,并与先前发表的非分子数据集(71个颅骨-牙齿-外部特征)连接在一起。进行了组合分析,包括发布到非分子数据集的IRBP(感光体间类视黄醇结合蛋白,1158 bp),DMP-1(牙本质基质蛋白1,1176 bp)和RAG-1(重组酶激活基因,2790 bp)序列。 。为了比较和评估颅后形态的纳入对先前假说的影响,对二甲苯啡类群的分类单元采样几乎与最近有关二蝶蚜系统发育的系列论文中所使用的相似。颅后信息包括来自轴向骨骼的48个字符,来自前肢的37个字符和来自后肢的29个字符。我提供了每个颅后特征的解剖学描述,并增加了在二氢吗啡组中观察到的不同状况的详细信息,以及一些功能含义。在形态分析和组合分析中,被讨论为多态性特征的不同假设也可被视为复合项(CO)和转换序列(TS)。多态后颅骨字符的不同编码产生的拓扑通常并不矛盾。与颅骨后证据中的CO分析相比,主要差异在于TS分析中树木的分辨率下降,而两种编码中的支持率通常都较低。从颅后证据中获得的拓扑结构支持了一些已经恢复的关系,例如大负鼠(Didelphis,Philander,Chironectes,Lutreolina和Metachirus)的单性,以及几个多型群体,例如Didelphis,Monodelphis,Marmosops,Thylamys,Micoureus和菲兰德。此外,Hyladelphys在花色胺和二苯乙酮之间的中间位置保留在CO分析中。将颅后数据集包含到以前的非分子证据中几乎不会导致不一致,尽管已检测到拓扑结构和支持值发生了一些变化。就仅颅骨后数据集而言,多态字符的不同编码的影响是相似的。在这种情况下,CO分析获得的拓扑也比TS分析得到更好的解析。与仅进行颅后分析相似,使用两种编码在总形态学证据中获得的拓扑是高度一致的,但是TS处理似乎无法有助于保留更多的系统发育信息,因为可以更好地解析CO分析。尽管将TS编码造成损失,但在CO编码中,将颅后证据添加到已发布的组合数据集(即形态学,IRBP,DMP-1和RAG-1序列)中得到的关系在大多数情况下在CO编码中得到了较好的解析和支持。在严格的共识下解决。从这个意义上说,可以根据对多态性条目和分区分析(例如,小鼠负鼠,结节C和B的系统发育条件)所应用的处理方法,检测到深分支拓扑结构上的一些强烈差异。将颅后证据包括在总数据集中,我也恢复了Hyladelphys的中间位置,但从未通过结合RAG-1序列(Gruber,KF,RS Voss和SA中的B + I分支)最近恢复了远缘相关的进化枝。 Jansa。2007.迪德尔菲有袋动物中RAG1基因座的碱基组成异质性:对系统发育推断和GC含量演变的影响(系统生物学56:1-14)。但是,Netachirus nudicaudatus和Tlacuatzin canescens的位置受到很大影响。

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