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首页> 外文期刊>The Journal of molecular diagnostics: JMD >Analytical Validation of Quantitative Real-Time PCR Methods for Quantification of Trypanosoma cruzi DNA in Blood Samples from Chagas Disease Patients
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Analytical Validation of Quantitative Real-Time PCR Methods for Quantification of Trypanosoma cruzi DNA in Blood Samples from Chagas Disease Patients

机译:定量实时PCR方法定量分析南美锥虫病患者血样中锥虫锥虫DNA的分析验证

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摘要

An international study was performed by 26 experienced PCR laboratories from 14 countries to assess the performance of duplex quantitative real-time PCR (qPCR) strategies on the basis of TaqMan probes for detection and quantification of parasitic Loads in peripheral blood samples from Chagas disease patients. Two methods were studied: Satellite DNA (SatDNA) qPCR and kinetoplastid DNA (kDNA) qPCR. Both methods included an internal amplification control. Reportable range, analytical sensitivity, limits of detection and quantification, and precision were estimated according to international guidelines. In addition, inclusivity and exclusivity were estimated with DNA from stocks representing the different Trypanosoma cruzi discrete typing units and Tlypanosoma rangeli and Leishmania spp. Both methods were challenged against 156 blood samples provided by the participant laboratories, including samples from acute and chronic patients with varied clinical findings, infected by oral route or vectorial transmission. kDNA qPCR showed better analytical sensitivity than SatDNA qPCR with Limits of detection of 0.23 and 0.70 parasite equivalents/mL, respectively. Analyses of clinical samples revealed a high concordance in terms of sensitivity and parasitic loads determined by both SatDNA and kDNA qPCRs. This effort is a major step toward international validation of qPCR methods for the quantification of T. auzi DNA in human blood samples, aiming to provide an accurate surrogate biomarker for diagnosis and treatment monitoring for patients with Chagas disease.
机译:来自14个国家/地区的26个经验丰富的PCR实验室进行了一项国际研究,以基于TaqMan探针检测和定量查加斯病患者外周血样品中寄生虫含量的双定量实时PCR(qPCR)策略的性能进行评估。研究了两种方法:卫星DNA(SatDNA)qPCR和动质体DNA(kDNA)qPCR。两种方法均包括内部扩增对照。报告范围,分析灵敏度,检出限和定量限以及精密度是根据国际准则估算的。此外,用代表不同的锥虫锥虫分型单位和猪锥虫和利什曼原虫的原种的DNA估计包容性和排他性。两种方法都针对参与实验室提供的156份血液样本进行了挑战,其中包括来自急性和慢性患者的样本,这些样本的临床表现各不相同,并通过口服途径或载体传播感染。 kDNA qPCR显示出比SatDNA qPCR更好的分析灵敏度,检出限分别为0.23和0.70寄生虫当量/ mL。临床样品分析显示,在灵敏度和由SatDNA和kDNA qPCR确定的寄生虫负荷方面,一致性很高。这项工作是迈向定量PCR方法的国际验证的重要一步,该方法用于定量人类血液样品中的紫罗兰(T.auzi)DNA,旨在为查加斯病患者的诊断和治疗监测提供准确的替代生物标记。

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