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首页> 外文期刊>Journal of Clinical Microbiology >Identification of Legionella Species by Use of an Oligonucleotide Array
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Identification of Legionella Species by Use of an Oligonucleotide Array

机译:使用寡核苷酸阵列鉴定军团菌种。

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The genus Legionella contains a diverse group of motile, asaccharolytic, nutritionally fastidious gram-negative rods. Legionella pneumophila is the most important human pathogen, followed by L. micdadei, L. longbeachae, L. dumoffii, and other rare species. Accurate identification of Legionella spp. other than L. pneumophila is difficult because of biochemical inertness and phenotypic identity of different species. The feasibility of using an oligonucleotide array for identification of 18 species of Legionella was evaluated in this study. The method consisted of PCR amplification of the macrophage infectivity potentiator mip gene, followed by hybridization of the digoxigenin-labeled PCR products to a panel of 30 oligonucleotide probes (16- to 24-mers) immobilized on a nylon membrane. A collection of 144 target strains (strains we aimed to identify) and 50 nontarget strains (44 species) were analyzed by the array. Both test sensitivity (144/144 strains) and specificity (50/50 strains) of the array were 100%. The whole procedure for identification of Legionella species by the array can be finished within a working day, starting from isolated colonies. It was concluded that species identification of clinically relevant Legionella spp. by the array method is very reliable and can be used as an accurate alternative to conventional or other molecular methods for identification of Legionella spp.
机译: Legionella 属包含各种各样的运动性,糖解性,营养优良的革兰氏阴性棒。 肺炎军团菌(Legionella pneumophila)是最重要的人类病原体,其次是 L。 micdadei,L。longbeachae,L。dumoffii 等稀有物种。准确鉴定 spp。除了 L。由于不同物种的生化惰性和表型同一性,使肺炎菌很困难。在这项研究中评估了使用寡核苷酸阵列鉴定18种的可行性。该方法包括对巨噬细胞感染增强子 mip 基因进行PCR扩增,然后将洋地黄毒苷标记的PCR产物与固定在尼龙上的30种寡核苷酸探针(16至24聚体)进行杂交膜。阵列分析了144个目标菌株(我们旨在鉴定的菌株)和50个非目标菌株(44种)的集合。阵列的测试灵敏度(144/144株)和特异性(50/50株)均为100%。通过阵列鉴定 Legionella 物种的整个过程可以在一个工作日内完成,从分离的菌落开始。结论是临床相关的 spp的物种鉴定。阵列方法的鉴定非常可靠,可作为常规方法或其他分子方法的准确替代物,用于鉴定 Legionella spp。

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