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首页> 外文期刊>Journal of Clinical Microbiology >Role of Real-Time Molecular Typing in the Surveillance of Campylobacter Enteritis and Comparison of Pulsed-Field Gel Electrophoresis Profiles from Chicken and Human Isolates
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Role of Real-Time Molecular Typing in the Surveillance of Campylobacter Enteritis and Comparison of Pulsed-Field Gel Electrophoresis Profiles from Chicken and Human Isolates

机译:实时分子分型在弯曲杆菌肠炎监测中的作用以及来自鸡和人分离株的脉冲场凝胶电泳图谱的比较

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摘要

The goal of the present study was to assess the contribution of real-time molecular typing, used alone or with clinical surveillance, to the prompt identification of clusters of Campylobacter enteritis. Potential poultry sources were sought by comparing the pulsed-field gel electrophoresis genotypes of human and fresh whole retail chicken isolates collected during the same study period. Among 183 human isolates, 82 (45%) had unique genotypes, 72 (39%) represented 26 clusters of 2 to 7 isolates each, and 29 (16%) represented three clusters of 8 to 11 isolates each. Molecular typing was useful for the confirmation of outbreaks suspected on the basis of epidemiological surveillance, but for most small clusters, no epidemiological link could be established. Thus, the added value of real-time molecular typing is questionable, since the numerous small clusters identified were of unclear public health significance. Among 177 chickens, 41 (23%) yielded campylobacter isolates; of these, 19 (46%) had genotypes similar to those of 41 (22%) human isolates. However, a temporal association was demonstrated in only a minority of cases, and most genotypes were present only in a single species, suggesting that sources other than chickens are important in human campylobacteriosis. Further investigation with samples from water and other possible environmental sources is needed to define the most efficient strategy for the application of molecular typing and identification of the source(s) of sporadic cases of campylobacteriosis.
机译:本研究的目的是评估单独使用或与临床监测结合使用的实时分子分型对及时识别 Campylobacter 肠炎簇的作用。通过比较在同一研究期间收集的人类和新鲜全零售鸡肉分离株的脉冲场凝胶电泳基因型,寻找潜在的家禽来源。在183个人类分离株中,有82个(45%)具有独特的基因型,72个(39%)代表26个簇,每个2至7个分离株,29个(16%)代表三个簇,每个8至11个分离株。分子分型可用于根据流行病学监测确认疑似疫情,但对于大多数小型集群,无法建立流行病学联系。因此,实时分子分型的附加值值得怀疑,因为确定的众多小簇对公共卫生的意义尚不清楚。在177只鸡中,有41只(23%)产生了弯曲杆菌分离株。其中,有19种(46%)的基因型与41种(22%)人类分离株的基因型相似。然而,仅在少数情况下证明了时间相关性,大多数基因型仅存在于单个物种中,这表明除了鸡以外的其他来源在人类弯曲菌病中也很重要。需要对水和其他可能的环境来源的样品进行进一步研究,以确定最有效的分子分型应用方法,并鉴定散发性弯曲菌病病例的来源。

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