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Comparative study of texture measurements for cellular organelle recognition

机译:蜂窝细胞器识别纹理测量的比较研究

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The ability of four methods to perform automatic texture discrimination of three cellular organelles (nucleus, mitochondria and lipid droplets) from autoradiographic images is investigated. The four methods studied are the first-order statistics of the gray-level histogram, the gray-level difference method, the gray-level run length method, and the spatial gray-level dependence method. The influence of parameters like the number of features, the number of gray-level classes, the orientation and step size of the analysis, and the effect of preprocessing the images by histogram equalization and image reduction were also analyzed to optimize the performance of the methods. The nearest neighbor pattern recognition algorithm using the Mahalanobis distance was used to evaluate the performance of the methods. First, a training set of 30 samples per organelle was chosen to train the classifier and to select the best discriminant features. The probability of error was estimated with the leave-one-out method and the results are expressed in percentage of correct classifications. The study shows that features extracted using the spatial gray-level dependence method were the most discriminate ones. The best features set was then applied to a test population of 734 cellular organelles to differentiate the three classes. Correct classifications occurred for 95% of cases, which indicates that it is possible to achieve a semi-automatic analysis of autoradiographic images.
机译:的四种方法来从放射自显影图像执行三个细胞器(细胞核,线粒体和脂滴)自动纹理判别的能力进行了研究。所研究的四种方法的灰度级直方图,灰度差的方法,所述灰度级的游程长度法,和空间灰度依赖性的方法的一阶统计数字。的像的特征的数量,灰度等级的数量,分析的取向和步长大小,和预处理通过直方图均衡化和图像缩小的图像的效果参数的影响进行了分析以优化的方法的性能。使用马哈拉诺比斯距离最近邻模式识别算法来评估的方法的性能。首先,训练集的每细胞器30倍的样品被选为训练分类和选择最佳判别特征。错误的概率是用留一法估计,结果正确分类的百分比来表示。研究表明,使用特征空间灰度依赖性的方法提取是最判别的。然后,功能设定最佳施到734分细胞器测试人口来区分三类。正确分类发生了95%的病例,这表明它有可能实现放射自显影图像的半自动的分析。

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