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Comparative study of texture measurements for cellular organelle recognition

机译:用于细胞器识别的纹理测量的比较研究

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Abstract: The ability of four methods to perform automatic texture discrimination of three cellular organelles (nucleus, mitochondria and lipid droplets) from autoradiographic images is investigated. The four methods studied are the first-order statistics of the gray-level histogram, the gray-level difference method, the gray-level run length method, and the spatial gray-level dependence method. The influence of parameters like the number of features, the number of gray-level classes, the orientation and step size of the analysis, and the effect of preprocessing the images by histogram equalization and image reduction were also analyzed to optimize the performance of the methods. The nearest neighbor pattern recognition algorithm using the Mahalanobis distance was used to evaluate the performance of the methods. First, a training set of 30 samples per organelle was chosen to train the classifier and to select the best discriminant features. The probability of error was estimated with the leave-one-out method and the results are expressed in percentage of correct classifications. The study shows that features extracted using the spatial gray-level dependence method were the most discriminate ones. The best features set was then applied to a test population of 734 cellular organelles to differentiate the three classes. Correct classifications occurred for 95% of cases, which indicates that it is possible to achieve a semi-automatic analysis of autoradiographic images.!
机译:摘要:研究了从放射自显影图像中四种方法对三个细胞器(细胞核,线粒体和脂质液滴)进行自动纹理识别的能力。研究的四种方法是灰度直方图的一阶统计,灰度差法,灰度游程法和空间灰度依赖法。还分析了特征数量,灰度等级数量,分析的方向和步长等参数的影响,以及通过直方图均衡和图像缩小对图像进行预处理的效果,以优化方法的性能。 。使用马氏距离的最近邻模式识别算法用于评估方法的性能。首先,选择每个细胞器30个样本的训练集来训练分类器并选择最佳判别特征。错误的概率是通过留一法进行估计的,结果以正确分类的百分比表示。研究表明,使用空间灰度相关性方法提取的特征是最可分辨的特征。然后将最佳功能集应用于734个细胞器的测试群体,以区分这三个类别。对95%的病例进行了正确的分类,这表明可以实现放射自显影图像的半自动分析。

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