Disclosed is a system for analysis of microscopic image data which includes a data processing system. Pixel classification data for each of a plurality of pixels of the microscopic image data are read. The pixel classification data include for each of the pixels of the microscopic image data, binary or probabilistic classification data for classifying the pixel of the microscopic image data into one or more object classes of pre-defined objects which are shown by the image. At least a portion of the pixels of the microscopic image data are grouped to form one or more pixels groups. For each of the pixel groups, probabilistic group classification data are calculated depending on the pixel classification data of the pixels of the respective group. The probabilistic group classification data are indicative of a probability that the group shows at least a portion of an object of the respective object class.
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