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Phylogenetics of Andropogoneae (Poaceae: Panicoideae) Based on Nuclear Ribosomal Internal Transcribed Spacer and Chloroplast trnL–F Sequences

机译:基于核核糖体内转录间隔区和叶绿体trnL-F序列的andropogoneae(禾本科:panicoideae)的系统发育学

摘要

Phylogenetic relationships among 85 species representing 35 genera in the grass tribe Andropogoneae were estimated from maximum parsimony and Bayesian analyses of nuclear ITS and chloroplast trnL–F DNA sequences. Ten of the 11 subtribes recognized by Clayton and Renvoize (1986) were sampled. Independent analyses of ITS and trnL–F yielded mostly congruent, though not well resolved, topologies. Arundinella is sister to Andropogoneae in the trnL–F phylogeny and is nested within the tribe in the ITS and combined data trees. Tristachya is sister to Andropogoneae + Arundinella in the ITS phylogeny. Four clades are common to the ITS and trnL–F phylogenies and the trees from the combined data set. Clade A consists of Andropogon, Diectomis, Hyparrhenia, Hyperthelia, and Schizachyrium. Within this clade, Andropogon distachyos, Hyparrhenia, and Hyperthelia form clade C. Clade B consists of Bothriochloa, Capillipedium, and Dichanthium, and clade D includes Chrysopogon and Vetiveria. Analysis of the combined data resulted in an unsupported larger clade comprising clades A and B plus Cymbopogon, and a sister clade of Heteropogon, Iseilema, and Themeda. This larger clade is similar to the core Andropogoneae clade previously reported (Spangler et al. 1999; Mathews et al. 2002). Based on our sample, which represents 41% of the tribe’s genera, most of Clayton and Renvoize’s (1986) subtribes are not monophyletic.
机译:根据对核ITS和叶绿体trnL-F DNA序列的最大简约性和贝叶斯分析,可以估算出代表草科Andropogoneae的35个属的85种植物之间的亲缘关系。 Clayton和Renvoize(1986)识别的11个亚族中有10个被采样。对ITS和trnL-F的独立分析得出的拓扑基本一致,尽管解决的不好。 Arundinella在trnL–F系统发育中是Andropogoneae的姐妹,并嵌套在ITS和组合数据树的部落中。 Tristachya在ITS系统发育中是Andropogoneae + Arundinella的姐妹。 ITS和trnL–F系统发育以及来自组合数据集的树木共有四个进化枝。进化枝A由直足动物,双歧杆菌,hyperrhenia,上皮细胞增生和裂殖藻组成。在该进化枝中,雄足纲,鳞茎纲和hyperthelia形成进化枝C。进化枝B由鲍氏衣藻,毛鳞鱼和双齿th组成,进化枝D包括金毛po和香根草。对合并数据的分析导致了一个不受支持的较大进化枝,包括进化枝A和B加上Cymbopogon,以及姊妹进化树Heteropogon,Iseilema和Themeda。这个更大的进化枝类似于先前报道的核心Andropogoneae进化枝(Spangler等,1999; Mathews等,2002)。根据我们代表该部落属41%的样本,大多数Clayton和Renvoize(1986)的部落都不是单系的。

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