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Discovering differences in gender-related skeletal muscle aging through the majority voting-based identification of differently expressed genes

机译:通过基于多数投票的不同表达基因的鉴定发现性别相关的骨骼肌衰老的差异

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摘要

Understanding gene function (GF) is still a significant challenge in system biology. Previously, several machine learning and computational techniques have been used to understand GF. However, these previous attempts have not produced a comprehensive interpretation of the relationship between genes and differences in both age and gender. Although there are several thousands of genes, very few differentially expressed genes play an active role in understanding the age and gender differences. The core aim of this study is to uncover new biomarkers that can contribute towards distinguishing between male and female according to the gene expression levels of skeletal muscle (SM) tissues. In our proposed multi-filter system (MFS), genes are first sorted using three different ranking techniques (t-test, Wilcoxon and Receiver Operating Characteristic (ROC)). Later, important genes are acquired using majority voting based on the principle that combining multiple models can improve the generalization of the system. Experiments were conducted on Micro Array gene expression dataset and results have indicated a significant increase in classification accuracy when compared with existing system.
机译:了解基因功能(GF)仍然是系统生物学中的重大挑战。以前,几种机器学习和计算技术已用于理解GF。但是,这些先前的尝试尚未对基因与年龄和性别差异之间的关系产生全面的解释。尽管有成千上万的基因,但很少有差异表达的基因在理解年龄和性别差异方面发挥积极作用。这项研究的核心目的是发现新的生物标记,这些标记可以根据骨骼肌(SM)组织的基因表达水平来区分男性和女性。在我们提出的多过滤器系统(MFS)中,首先使用三种不同的排序技术(t检验,Wilcoxon和接收器操作特征(ROC))对基因进行排序。后来,基于组合多个模型可以提高系统通用性的原理,使用多数投票获得重要基因。在微阵列基因表达数据集上进行了实验,结果表明与现有系统相比,分类准确性显着提高。

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