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Probing intermolecular interactions and three-dimensional packing of organic molecules by solid-state NMR

机译:通过固态NmR探测分子间相互作用和有机分子的三维堆积

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摘要

Identifying the ordered three-dimensional structures formed by atoms and molecules is essential to understanding the properties of solid-state materials. Solid-state NMR is an extremely sensitive structural probe and offers atomic-level information regarding the three-dimensional packing of molecules and the intermolecular interactions, for example, hydrogen bonding, which control this. Recently, the combination of advanced solid-state NMR experiments and complementary computational techniques have led to the emergence of the field of `NMR crystallography', which shows great potential for the structural determination of systems where traditional diffraction-based methods are not suitable. The work in this thesis uses a combined approach of high-resolution MAS NMR experiments and first-principles (GIPAW) calculations of NMR parameters to provide structural insight into a range of challenging organic systems. In particular, 1H-13C and 1H DQ (double-quantum) CRAMPS (combined rotation and multiple pulse spectroscopy) techniques are employed to identify 1H and 13C NMR chemical shifts and close 1H-1H interatomic proximities. A new 1H DQ-13C SQ (single-quantum) experiment is presented that better allows intra- and intermolecular 1H-1H distances to be identified in the pharmaceutical compound, penicillin and the disaccharide, β-maltose monohydrate, notably enabling, for the first time, the full 1H resonance assignment of the latter. Using a similar methodology, a `spectrum to structure' approach is applied to identify modes of self assembly for guanosine derivatives for which single-crystal diffraction structures could not be obtained. In addition, chemical shift calculations on the full unit cell (348 atoms) of a complex pyrazole allow the complete assignment of experimental 1H, 13C resonances for each of the six independent molecules of the asymmetric unit cell. Finally, hydrogen-bond mediated 2hJ15N17O and 2hJ15N13C couplings across NH...O and N...HC hydrogen bonds are determined experimentally for the first time by the use of heteronuclear spin-echo experiments. The J couplings, which have also been determined using first-principles calculations, are a quantitative measure of hydrogen-bonding strength.
机译:识别由原子和分子形成的有序三维结构对于理解固态材料的特性至关重要。固态NMR是一种非常敏感的结构探针,它提供有关分子的三维堆积和控制这种相互作用的分子间相互作用(例如氢键)的原子级信息。最近,先进的固态NMR实验与互补的计算技术相结合,导致了“ NMR晶体学”领域的出现,这为传统的基于衍射的方法不适合的系统结构确定显示了巨大的潜力。本文的工作采用高分辨率MAS NMR实验和NMR参数的第一原理(GIPAW)计算的组合方法,以提供对一系列具有挑战性的有机系统的结构见解。特别是,采用1H-13C和1H DQ(双量子)CRAMPS(旋转和多脉冲光谱结合技术)技术来识别1H和13C NMR化学位移并接近1H-1H原子间邻近度。提出了一个新的1H DQ-13C SQ(单量子)实验,该实验可以更好地识别药物化合物青霉素和二糖β-麦芽糖一水合物中的分子内和分子间1H-1H距离,尤其是第一次时间,后者的完整1H共振分配。使用类似的方法,采用“光谱到结构”方法来识别鸟苷衍生物的自组装模式,而鸟苷衍生物无法获得单晶衍射结构。此外,通过对复杂吡唑的整个晶胞(348个原子)进行化学位移计算,可以完全分配不对称晶胞的六个独立分子中每个实验的1H,13C共振。最后,首次通过异核自旋回波实验确定了横跨NH ... O和N ... HC氢键的氢键介导的2hJ15N17O和2hJ15N13C偶联。 J偶合(也已使用第一性原理计算确定)是氢键强度的定量度量。

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    Webber Amy Louise;

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  • 年度 2010
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  • 原文格式 PDF
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