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A Novel Center Star Multiple Sequence Alignment Algorithm Based on Affine Gap Penalty and K-Band

机译：基于仿射间隙罚分和K带的新中心星多序列比对算法

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Zou Quan; Shan Xiao; Jiang Yi;
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年度 2012
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1. Multiple Sequence Alignment Based on a Suffix Tree and Center-Star Strategy: A Linear Method for Multiple Nucleotide Sequence Alignment on Spark Parallel Framework [J] . Su Wenhe, Liao Xiangke, Lu Yutong, Journal of computational biology: A journal of computational molecular cell biology . 2017,第12期

机译：基于后缀树和中心星策略的多个序列对齐：一种用于火花并联框架上多个核苷酸序列对准的线性方法
2. Multiple sequence alignment with affine gap by using multi-objective genetic algorithm. [J] . Mehmet Kaya, Abdullah Sarhan, Reda Alhajj Computer Methods and Programs in Biomedicine: An International Journal Devoted to the Development, Implementation and Exchange of Computing Methodology and Software Systems in Biomedical Research and Medical Practice . 2014,第1期

机译：利用多目标遗传算法进行仿射缺口多序列比对。
3. Optimizing multiple sequence alignments using a genetic algorithm based on three objectives: structural information, non-gaps percentage and totally conserved columns [J] . Ortuno Francisco M., Valenzuela Olga, Rojas Fernando, Bioinformatics . 2013,第17期

机译：使用基于三个目标的遗传算法优化多个序列比对：结构信息，非空位百分比和完全保守的色谱柱
4. ALIGNING SEQUENCES WITH NON-AFFINE GAP PENALTY: PLAINS ALGORITHM, A PRACTICAL IMPLEMENTATION, AND ITS BIOLOGICAL APPLICATIONS IN COMPARATIVE GENOMICS [C] . OFER GILL, YI ZHOU, BUD MISHRA International Conference on Bioinformatics and its Applications . 2005

机译：将序列与非染色隙罚分配：平原算法，实际实施及其在比较基因组学中的生物学应用
5. Genetic algorithm approaches for efficient multiple molecular sequence alignment. [D] . Zhang, Ching. 1998

机译：高效的多分子序列比对的遗传算法方法。
6. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting position-specific gap penalties and weight matrix choice. [O] . J D Thompson, D G Higgins, T J Gibson 1994

机译：CLUSTAL W：通过序列加权特定位置的空位罚分和权重矩阵选择提高逐步进行多序列比对的灵敏度。
7. Pair HMM based gap statistics for re-evaluation of indels in alignments with affine gap penalties: Extended Version [O] . Schönhuth, Alexander, Salari, Raheleh, Sahinalp, S. Cenk 2010

机译：配对基于Hmm的差距统计，用于在比对中重新评估插入缺失与仿射差距惩罚：扩展版本

A Novel Center Star Multiple Sequence Alignment Algorithm Based on Affine Gap Penalty and K-Band

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