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Pathways for Arene Oxidation in Non-Heme Diiron Enzymes: Lessons from Computational Studies on Benzoyl-Coenzyme A Epoxidase

机译:非血红素二铁酶中芳烃氧化的途径:苯甲酰辅酶A环氧化酶的计算研究的经验教训

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摘要

Oxygenation of aromatic rings using O2 is catalyzed by several non-heme carboxylate-bridged diiron enzymes. In order to provide a general mechanistic description for these reactions, computational studies were carried out at the ONIOM(B3LYP/BP86/Amber) level on the non-heme diiron enzyme benzoyl coenzyme A epoxidase BoxB. The calculations revealed four possible pathways for attacking the aromatic ring: a) electrophilic (2e–) attack by a bis(μ-oxo)-diiron(IV) species (Q pathway); b) electrophilic (2e–) attack via the σ* orbital of a μ-η2:η2-peroxo-diiron(III) intermediate (Pσ* pathway); c) radical (1e–) attack via the π*-orbital of a superoxo-diiron(II,III) species (Pπ* pathway); d) radical (1e–) attack of a partially quenched bis(μ-oxo)-diiron(IV) intermediate (Q′ pathway). The results allowed earlier work of de Visser on olefin epoxidation by diiron complexes and QM-cluster studies of Liao and Siegbahn on BoxB to be put into a broader perspective. Parallels with epoxidation using organic peracids were also examined. Specifically for the BoxB enzyme, the Q pathway was found to be the most preferred, but the corresponding bis(μ-oxo)-diiron(IV) species is significantly destabilized and not expected to be directly observable. Epoxidation via the Pσ* pathway represents an energetically somewhat higher lying alternative; possible strategies for experimental discrimination are discussed. The selectivity toward epoxidation is shown to stem from a combination of inherent electronic properties of the thioacyl substituent and enzymatic constraints. Possible implications of the results for toluene monooxygenases are considered as well.
机译:几种非血红素羧酸盐桥联的二铁酶可催化使用O2氧化芳香环。为了提供这些反应的一般机理描述,在ONIOM(B3LYP / BP86 / Amber)水平上对非血红素二铁酶苯甲酰基辅酶A环氧化酶BoxB进行了计算研究。计算结果揭示了攻击芳环的四种可能途径:a)双(μ-氧代)-二铁(IV)物种的亲电子(2e-)攻击(Q途径); b)通过μ-η2:η2-过氧二铁(III)中间体的σ*轨道(Pσ*途径)进行亲电(2e–)攻击; c)通过超氧二铁(II,III)物种的π*轨道(Pπ*途径)进行自由基(1e–)攻击; d)部分淬灭的双(μ-氧代)-二铁(IV)中间体(Q'途径)的自由基(1e–)攻击。研究结果使de Visser可以更早地研究二铁配合物对烯烃的环氧化作用,以及BoxB上Liao和Siegbahn的QM簇研究的广阔前景。还检查了使用有机过酸与环氧化反应的平行反应。特别是对于BoxB酶,发现Q途径是最优选的,但是相应的bis(μ-oxo)-diiron(IV)物种明显不稳定,不能直接观察到。通过Pσ*途径的环氧化代表了能量较高的另一种选择。讨论了可能的实验区分策略。已显示出对环氧化的选择性源于硫酰基取代基的固有电子性质和酶促约束条件的组合。还考虑了该结果对于甲苯单加氧酶的可能含义。

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    Rokob Tibor András;

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  • 年度 2016
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