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The Enterococcus hirae R40 penicillin-binding protein 5 and the methicillin-resistant Staphylococcus aureus penicillin-binding protein 2' are similar.

机译:平肠球菌R40青霉素结合蛋白5和耐甲氧西林金黄色葡萄球菌青霉素结合蛋白2'相似。

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摘要

The penicillin-resistant Enterococcus hirae R40 has a typical profile of membrane-bound penicillin-binding proteins (PBPs) except that the 71 kDa PBP5 of low penicillin affinity represents about 50% of all the PBPs present. Water-soluble tryptic-digest peptides were selectively produced from PBP5, their N-terminal regions were sequenced and synthetic oligonucleotides were used as primers to generate a 476 bp DNA fragment by polymerase chain reaction. On the basis of these data, the PBP5-encoding gene was cloned in Escherichia coli by using pBR322 as vector. The gene, included in a 7.1 kb insert, had the information for a 678-amino acid-residue protein. PBP5 shows similarity, in the primary structure, with the high-molecular-mass PBPs of class B. In particular, amino acid alignment of the enterococcal PBP5 and the methicillin-resistant staphylococcal PBP2' generates scores that are 30, for the N-terminal domains, and 53, for the C-terminal domains, standard deviations above that expected for a run of 20 randomized pairs of proteins having the same amino acid compositions as the two proteins under consideration.
机译:抗青霉素的平肠肠球菌R40具有膜结合青霉素结合蛋白(PBP)的典型特征,除了具有低青霉素亲和力的71 kDa PBP5代表所有存在的PBP的约50%。从PBP5选择性地生产水溶性胰蛋白酶消化的肽,对其N端区域进行测序,并使用合成的寡核苷酸作为引物通过聚合酶链反应生成476 bp的DNA片段。根据这些数据,以pBR322为载体,将编码PBP5的基因克隆到大肠杆菌中。该基因包含在7.1 kb的插入片段中,具有678个氨基酸残基蛋白质的信息。 PBP5在一级结构中显示与B类高分子PBP相似。特别是,肠球菌PBP5和耐甲氧西林葡萄球菌PBP2'的氨基酸比对在N端得分为30对于C-末端结构域,在图5中,对于C末端结构域而言,其具有53个氨基酸,标准偏差高于对具有与所考虑的两个蛋白质相同的氨基酸组成的20个随机蛋白质对的运行所期望的标准偏差。

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