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Agro-environmental determinants of avian influenza circulation: A multisite study in Thailand, Vietnam and Madagascar

机译:禽流感流行的农业环境决定因素:泰国,越南和马达加斯加的多点研究

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摘要

Outbreaks of highly pathogenic avian influenza have occurred and have been studied in a variety of ecological systems. However, differences in the spatial resolution, geographical extent, units of analysis and risk factors examined in these studies prevent their quantitative comparison. This study aimed to develop a high-resolution, comparative study of a common set of agro-environmental determinants of avian influenza viruses (AIV) in domestic poultry in four different environments: (1) lower-Northern Thailand, where H5N1 circulated in 2004-2005, (2) the Red River Delta in Vietnam, where H5N1 is circulating widely, (3) the Vietnam highlands, where sporadic H5N1 outbreaks have occurred, and (4) the Lake Alaotra region in Madagascar, which features remarkable similarities with Asian agro-ecosystems and where low pathogenic avian influenza viruses have been found. We analyzed H5N1 outbreak data in Thailand in parallel with serological data collected on the H5 subtype in Vietnam and on low pathogenic AIV in Madagascar. Several agro-environmental covariates were examined: poultry densities, landscape dominated by rice cultivation, proximity to a water body or major road, and human population density. Relationships between covariates and AIV circulation were explored using spatial generalized linear models. We found that AIV prevalence was negatively associated with distance to the closest water body in the Red River Delta, Vietnam highlands and Madagascar. We also found a positive association between AIV and duck density in the Vietnam highlands and Thailand, and with rice landscapes in Thailand and Madagascar. Our findings confirm the important role of wetlands-rice-ducks ecosystems in the epidemiology of AI in diverse settings. Variables influencing circulation of the H5 subtype in Southeast Asia played a similar role for low pathogenic AIV in Madagascar, indicating that this area may be at risk if a highly virulent strain is introduced. (Résumé d'auteur)
机译:高致病性禽流感的暴发已经发生,并且已经在各种生态系统中进行了研究。但是,这些研究中检查的空间分辨率,地理范围,分析单位和风险因素存在差异,因此无法进行定量比较。这项研究旨在针对四种不同环境下的家禽在禽流感病毒(AIV)的一系列常见农业环境决定因素中进行高分辨率的比较研究:(1)泰国北部,H5N1于2004- 2005年,(2)H5N1广泛流传的越南红河三角洲;(3)发生零星H5N1暴发的越南高地;(4)马达加斯加的Alaotra湖地区,该地区与亚洲农业有显着相似之处-生态系统以及发现低致病性禽流感病毒的地方。我们分析了泰国的H5N1暴发数据,以及越南的H5亚型和马达加斯加的低致病性禽流感的血清学数据。研究了几种农业环境的协变量:家禽密度,以稻米种植为主的景观,靠近水体或主要道路以及人口密度。使用空间广义线性模型探索协变量与AIV循环之间的关系。我们发现,在红河三角洲,越南高地和马达加斯加,AIV的流行与距最近水体的距离呈负相关。我们还发现越南高地和泰国的AIV与鸭密度之间呈正相关,泰国和马达加斯加的稻米景观也与AIV有正相关。我们的发现证实了湿地-稻-鸭生态系统在不同环境中的AI流行病学中的重要作用。影响东南亚H5亚型循环的变量在马达加斯加的低致病性AIV中起着相似的作用,表明如果引入高毒力毒株,该地区可能处于危险之中。 (Résuméd'auteur)

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