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Entropic transport in confined media: a challenge for computational studies in biological and soft-matter systems

机译:受限介质中的熵传输:生物和软物质系统中的计算研究面临的挑战

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摘要

Transport in small-scale biological and soft-matter systems typically occurs under confinement conditions in which particles proceed through obstacles and irregularities of the boundaries that may significantly alter their trajectories. A transport model that assimilates the confinement to the presence of entropic barriers provides an efficient approach to quantify its effect on the particle current and the diffusion coefficient. We review the main peculiarities of entropic transport and treat two cases in which confinement effects play a crucial role, with the appearance of emergent properties. The presence of entropic barriers modifies the mean first-passage time distribution and therefore plays a very important role in ion transport through micro- and nano-channels. The functionality of molecular motors, modeled as Brownian ratchets, is strongly affected when the motor proceeds in a confined medium that may constitute another source of rectification. The interplay between ratchet and entropic rectification gives rise to a wide variety of dynamical behaviors, not observed when the Brownian motor proceeds in an unbounded medium. Entropic transport offers new venues of transport control and particle manipulation and new ways to engineer more efficient devices for transport at the nanoscale.
机译:小规模生物和软物质系统中的运输通常发生在限制条件下,在这种情况下,粒子穿过边界的障碍和不规则处前进,这可能会大大改变其轨迹。能够将传输限制在熵屏障的存在范围内的传输模型提供了一种有效的方法来量化其对粒子电流和扩散系数的影响。我们审查了熵传输的主要特点,并处理了两种情况,其中限制作用起着关键作用,并出现了紧急情况。熵垒的存在改变了平均首次通过时间的分布,因此在通过微通道和纳米通道的离子传输中起着非常重要的作用。当电动机在可能构成另一种整流源的密闭介质中运行时,分子电动机(以布朗棘轮模型为代表)的功能会受到严重影响。棘轮和熵整流之间的相互作用产生了各种各样的动力学行为,而当布朗运动在无边界的介质中进行时则没有观察到。熵传输提供了新的传输控制和粒子处理场所,为设计更高效的纳米级传输设备提供了新途径。

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