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Comparative genomics of the odorant-binding and chemosensory protein gene families across the arthropoda: origin and evolutionary history of the chemosensory system

机译:节肢动物中气味结合和化学感应蛋白基因家族的比较基因组学:化学感应系统的起源和进化史

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摘要

Chemoreception is a biological process essential for the survival of animals, as it allows the recognition of important volatile cues for the detection of food, egg-laying substrates, mates or predators, among other purposes. Furthermore, its role in pheromone detection may contribute to evolutionary processes such as reproductive isolation and speciation. This key role in several vital biological processes makes chemoreception a particularly interesting system for studying the role of natural selection in molecular adaptation. Two major gene families are involved in the perireceptor events of the chemosensory system: the odorant-binding protein (OBP) and chemosensory protein (CSP) families. Here, we have conducted an exhaustive comparative genomic analysis of these gene families in twenty Arthropoda species. We show that the evolution of the OBP and CSP gene families is highly dynamic, with a high number of gains and losses of genes, pseudogenes and independent origins of subfamilies. Taken together, our data clearly support the birth-and-death model for the evolution of these gene families with an overall high gene-turnover rate. Moreover, we show that the genome organization of the two families is significantly more clustered than expected by chance and, more important, that this pattern appears to be actively maintained across the Drosophila phylogeny. Finally, we suggest the homologous nature of the OBP and CSP gene families, dating back their MRCA (most recent common ancestor) to 380¿420 Mya, and we propose a scenario for the origin and diversification of these families.
机译:化学感受器是动物生存必不可少的生物学过程,因为它可以识别重要的挥发性线索,以检测食物,产卵底物,伴侣或捕食者等。此外,它在信息素检测中的作用可能有助于进化过程,例如生殖分离和物种形成。在几个重要的生物学过程中的关键作用使化学感受成为研究自然选择在分子适应中的作用的特别有趣的系统。化学感应系统的感受器事件涉及两个主要的基因家族:气味结合蛋白(OBP)和化学感应蛋白(CSP)家族。在这里,我们对二十个节肢动物物种中的这些基因家族进行了详尽的比较基因组分析。我们表明,OBP和CSP基因家族的进化是高度动态的,具有大量的基因,假基因和亚家族独立起源的得失。综上所述,我们的数据清楚地支持了这些基因家族进化的生死模型,总体上具有很高的基因周转率。此外,我们显示这两个家族的基因组组织比偶然地预期的要多得多,而且更重要的是,这种模式似乎在果蝇的系统发育中得到了积极维护。最后,我们提出了OBP和CSP基因家族的同源性,可以追溯到它们的MRCA(最近的共同祖先)到380-420 Mya,并且我们为这些家族的起源和多样化提出了一个方案。

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