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Biochemical properties and three-dimensional structures of two extracellular lipolytic enzymes from Bacillus subtilis

机译:枯草芽孢杆菌两种胞外脂解酶的生化性质和三维结构

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This article reviews our present knowledge on the extracellular lipolytic enzymes LipA and LipB from Bacillus subtilis. Growth of B. subtilis to the late logarithmic growth phase results in a total lipolytic activity of 12–18 units per liter of culture supernatant. Immunodetection with LipA- and LipB-specific antibodies indicated a differential expression of both lipolytic enzymes depending on the composition of the growth medium. LipA was produced in rich and in minimal medium, whereas LipB was present only in rich medium. The lipA and lipB genes were cloned and overexpressed in B. subtilis and Escherichia coli, the corresponding proteins purified to electrophoretic homogeneity and their substrate specificities, pH- and temperature stabilities were determined. The active site residue Ser78 of LipB is located in the consensus sequence Ala–X–Ser–X–Gly where the alanine replaces a glycine found in most of the bacterial lipases. The role of this Ala-residue was investigated by constructing LipB variant A76G thereby restoring the canonical lipase consensus motif. When compared with wild-type LipB this variant showed a markedly reduced thermostability at pH 11 but an increased stability at pH 5–7. These findings were rationalized by building a three-dimensional structural model of LipB using the atomic coordinates of the LipA crystal structure, which was solved recently. The LipB model structure revealed that 43 out of 45 residues, which are different from LipA, were located on the surface of LipB. The surface-exposed amino acids including those located at the rim of the active site cleft may cause the differences in specific activities between LipA and LipB.
机译:本文回顾了我们目前对枯草芽孢杆菌细胞外脂解酶LipA和LipB的了解。枯草芽孢杆菌生长到对数生长期后期,每升培养物上清液的总脂解活性为12-18个单位。 LipA和LipB特异性抗体的免疫检测表明两种脂解酶的差异表达取决于生长培养基的组成。 LipA在丰富的基本培养基中产生,而LipB仅在丰富的培养基中存在。将lipA和lipB基因克隆并在枯草芽孢杆菌和大肠杆菌中过表达,将相应的蛋白质纯化至电泳均一,并测定其底物特异性,pH和温度稳定性。 LipB的活性位点残基Ser78位于共有序列Ala–X–Ser–X–Gly中,其中丙氨酸取代了大多数细菌脂肪酶中的甘氨酸。通过构建LipB变体A76G,从而恢复典型的脂肪酶共有基序,研究了这种Ala残基的作用。与野生型LipB相比,此变体在pH 11时显示出明显降低的热稳定性,但在pH 5-7时则显示出增加的稳定性。通过使用LipA晶体结构的原子坐标建立LipB的三维结构模型,可以合理化这些发现,最近已解决了该问题。 LipB模型结构显示与LipA不同的45个残基中有43个位于LipB的表面上。暴露在表面的氨基酸(包括位于活动位点边缘的氨基酸)可能会引起LipA和LipB之间比活的差异。

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