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Transcriptome and Proteome Studies Reveal Candidate Attachment Genes during the Development of the Barnacle Amphibalanus Amphitrite

机译:转录组和蛋白质组学研究揭示了藤壶Amphibalanus Amphitrite发育过程中的候选附着基因。

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摘要

The acorn barnacle, Balanus amphitrite, is the main biofouling organism in marine environments. In the present study we profiled the transcriptome and proteome of B. amphitrite at different life stages (nauplius II, nauplius VI, and cyprid) from the Red Sea, where the average water surface temperature is 34°C and the salinity reaches 41%. We identified 65,784 expressed contigs, and a total of 1387 expressed proteins measured by quantitative proteomics. We found that osmotic stress, salt stress, hyperosmotic response and the Wnt signaling pathway were strongly up-regulated during the planktonic stage, while the MAPK pathway, lipid metabolism, and cuticle development genes were down-regulated. In the transition stage between the nauplius VI and the cyprid, genes that are involved in blood coagulation, cuticle development and eggshell formation were highly up-regulated, while the nitric oxide pathway, which stimulates the swimming and feeding response in marine invertebrates, was down-regulated. We are able to report for the first time that sound sensory system proteins are highly abundant in the nauplius VI stage, implying that these proteins are good targets for the development of new antifouling compounds. The results presented here together with the new genome-wide datasets for a non-model specie represent an important resource for the study of biofouling and development. Proteomics data are available via ProteomeXchange with identifier PXD004679.
机译:橡子藤壶Balanus amphitrite是海洋环境中主要的生物污染生物。在本研究中,我们从红海的不同生命阶段(无节幼体II,无节幼体VI和赛普勒斯)描绘了双歧双歧杆菌的转录组和蛋白质组,那里的平均水面温度为34°C,盐度达到41%。我们确定了65784个表达的重叠群,并通过定量蛋白质组学测量了总共1387个表达的蛋白质。我们发现,在浮游阶段渗透压,盐胁迫,高渗反应和Wnt信号通路被强烈上调,而MAPK通路,脂质代谢和表皮发育基因被下调。在无节幼体VI和塞浦路斯之间的过渡阶段,与血液凝固,表皮发育和蛋壳形成有关的基因被上调,而刺激海洋无脊椎动物游动和进食反应的一氧化氮途径则被降低。 -调节。我们能够首次报告在无节幼体VI阶段,声音感觉系统蛋白高度丰富,这意味着这些蛋白是开发新型防污化合物的良好靶标。此处介绍的结果与非模型物种的全基因组新数据集一起,是研究生物污染和发展的重要资源。蛋白质组学数据可通过ProteomeXchange获得,其标识符为PXD004679。

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