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Transcriptional Regulation of the Nitrile Hydratase Gene Cluster in Pseudomonas chlororaphis B23

机译:绿假单胞菌B23中腈水合酶基因簇的转录调控。

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摘要

An enormous amount of nitrile hydratase (NHase) is inducibly produced by Pseudomonas chlororaphis B23 after addition of methacrylamide as the sole nitrogen source to a medium. The expression pattern of the P. chlororaphis B23 NHase gene cluster in response to addition of methacrylamide to the medium was investigated. Recently, we reported that the NHase gene cluster comprises seven genes (oxdA, amiA, nhpA, nhpB, nhpC, nhpS, and acsA). Sequence analysis of the 1.5-kb region upstream of the oxdA gene revealed the presence of a 936-bp open reading frame (designated nhpR), which should encode a protein with a molecular mass of 35,098. The deduced amino acid sequence of the nhpR product showed similarity to the sequences of transcriptional regulators belonging to the XylS/AraC family. Although the transcription of the eight genes (nhpR, oxdA, amiA, nhpABC, nhpS, and acsA) in the NHase gene cluster was induced significantly in the P. chlororaphis B23 wild-type strain after addition of methacrylamide to the medium, transcription of these genes in the nhpR disruptant was not induced, demonstrating that nhpR codes for a positive transcriptional regulator in the NHase gene cluster. A reverse transcription-PCR experiment revealed that five genes (oxdA, amiA, nhpA, nhpB, and nhpC) are cotranscribed, as are two other genes (nhpS and acsA). The transcription start sites for nhpR, oxdA, nhpA, and nhpS were mapped by primer extension analysis, and putative –12 and –24 {sigma}54-type promoter binding sites were identified. NhpR was found to be the first transcriptional regulator of NHase belonging to the XylS/AraC family.
机译:在将甲基丙烯酰胺作为唯一的氮源添加到培养基中之后,由假单胞菌B23诱导产生大量的腈水合酶(NHase)。研究了在向培养基中添加甲基丙烯酰胺后,P。chlororaphis B23 NHase基因簇的表达模式。最近,我们报道了NHase基因簇包含七个基因(oxdA,amiA,nhpA,nhpB,nhpC,nhpS和acsA)。对oxdA基因上游1.5 kb区域的序列分析显示,存在一个936 bp开放阅读框(称为nhpR),该框架应编码分子量为35,098的蛋白质。推导的nhpR产物的氨基酸序列显示出与属于XylS / AraC家族的转录调节子的序列相似。尽管在向培养基中添加了甲基丙烯酰胺后,在P. chlororaphis B23野生型菌株中明显诱导了NHase基因簇中八个基因(nhpR,oxdA,amiA,nhpABC,nhpS和acsA)的转录。未诱导nhpR破坏基因中的基因,表明nhpR编码NHase基因簇中的阳性转录调节子。逆转录PCR实验表明,五个基因(oxdA,amiA,nhpA,nhpB和nhpC)与其他两个基因(nhpS和acsA)一起共转录。通过引物延伸分析来绘制nhpR,oxdA,nhpA和nhpS的转录起始位点,并鉴定出推定的–12和–24 {sigma} 54型启动子结合位点。 NhpR被发现是属于XylS / AraC家族的第一个NHase转录调节因子。

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