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A microfluidic concentrator array for quantitative predation assays of predatory microbes

机译:用于捕食性微生物定量捕食测定的微流控浓缩器阵列

摘要

We present a microfabricated concentrator array device that makes it possible to quantify the predation rate of Bdellovibrio bacteriovorus, a predatory microbe, toward its prey, Escherichia coli str. MG1655. The device can accumulate both prey and predator microbes sequentially within a series of concentrator arrays using the motility of the microbes and microfabricated arrowhead-shaped ratchet structures. Since the device can constrain both prey and predator cells within 200 pL chambers at a desired range of cell densities, it was demonstrated that the device cannot only enhance the possibility of studying predation processes/cycles directly at a single cell level but can also quantify the predation rates indirectly by measuring the time-dependent fluorescent intensity signals from the prey. Furthermore, the device can produce a wide range of initial prey to predator density ratios within various concentrator arrays through the use of microfluidic mixer structures on a single array chip, which allows us to study many different conditions with a single set of cultures, and quantitatively characterize the predation behaviour/rate. Lastly, we note that this novel concentrator array device can be a very powerful tool facilitating studies of microbial predations and microbe-microbe interaction and may be broadly used in other microbial biotechnological applications.
机译:我们介绍了一种微型制造的浓缩器阵列设备,它可以量化捕食性微生物Bdellovibrio bacteriovorus向其猎物Escherichia coli str的捕食率。 MG1655。该设备可以利用微生物的运动性和微型箭头形棘轮结构,在一系列集中器阵列中依次堆积猎物和捕食微生物。由于该设备可以在200 pL的腔室中以所需的细胞密度范围限制捕食和捕食细胞,因此证明该设备不仅可以提高直接在单个细胞水平上研究捕食过程/周期的可能性,而且可以量化捕食过程/捕食过程。通过测量猎物随时间变化的荧光强度信号间接捕食。此外,通过在单个阵列芯片上使用微流体混合器结构,该设备可以在各种浓缩器阵列中产生各种各样的初始猎物与捕食者密度比,这使我们能够使用一组培养物定量研究多种不同条件表征捕食行为/速率。最后,我们注意到,这种新颖的浓缩器阵列设备可以成为促进微生物捕食和微生物-微生物相互作用研究的非常强大的工具,并且可以广泛用于其他微生物生物技术应用中。

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