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Inferring the phylogenetic position of Brugia pahangi using 18S ribosomal RNA (18S rRNA) gene sequence

机译:使用18S核糖体RNA(18S rRNA)基因序列推论彭氏布鲁氏菌的系统发育位置

摘要

This paper presents the first reported use of 18S rRNA gene sequence to determine the phylogeny of Brugia pahangi. The 18S rRNA nucleotide sequence of a Malaysian B. pahangi isolate was obtained by PCR cloning and sequencing. The sequence was compared with 18S rRNA sequences of other nematodes, including those of some filarial nematodes. Multiple alignment and homology analysis suggest that B. pahangi is closely related to B. malayi and Wuchereria bancrofti. Phylogenetic trees constructed using Neighbour Joining, Minimum Evolution and Maximum Parsimony methods correctly grouped B. pahangi with other filarial nematodes, with closest relationship with B. malayi and W. bancrofti. The phylogeny of B. pahangi obtained in this study is in concordance with those previously reported, in which the 5S rRNA gene spacer region and cytochrome oxidase subunit I (COI) sequences were used.
机译:本文介绍了第一个报道的使用18S rRNA基因序列来确定布鲁加氏菌系统发育的报道。通过PCR克隆和测序获得马来西亚彭氏芽孢杆菌分离物的18S rRNA核苷酸序列。将该序列与其他线虫,包括某些丝状线虫的18S rRNA序列进行了比较。多重比对和同源性分析表明,彭亨氏芽孢杆菌与马来芽孢杆菌和班氏烟草紧密相关。使用邻居连接,最小进化和最大简约方法构建的系统发育树将B. pahangi与其他丝状线虫正确分组,与B. malayi和W. bancrofti关系最密切。在这项研究中获得的彭氏芽孢杆菌的系统发育与先前报道的一致,其中使用了5S rRNA基因间隔区和细胞色素氧化酶亚基I(COI)序列。

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