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Time-varying, serotype-specific force of infection of dengue virus

机译:登革热病毒感染的时变血清型特异性力量

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摘要

Infectious disease models play a key role in public health planning. These models rely on accurate estimates of key transmission parameters such as the force of infection (FoI), which is the per-capita risk of a susceptible person being infected. The FoI captures the fundamental dynamics of transmission and is crucial for gauging control efforts, such as identifying vaccination targets. Dengue virus (DENV) is a mosquito-borne, multiserotype pathogen that currently infects ∼390 million people a year. Existing estimates of the DENV FoI are inaccurate because they rely on the unrealistic assumption that risk is constant over time. Dengue models are thus unreliable for designing vaccine deployment strategies. Here, we present to our knowledge the first time-varying (daily), serotype-specific estimates of DENV FoIs using a spline-based fitting procedure designed to examine a 12-y, longitudinal DENV serological dataset from Iquitos, Peru (11,703 individuals, 38,416 samples, and 22,301 serotype-specific DENV infections from 1999 to 2010). The yearly DENV FoI varied markedly across time and serotypes (0–0.33), as did daily basic reproductive numbers (0.49–4.72). During specific time periods, the FoI fluctuations correlated across serotypes, indicating that different DENV serotypes shared common transmission drivers. The marked variation in transmission intensity that we detected indicates that intervention targets based on one-time estimates of the FoI could underestimate the level of effort needed to prevent disease. Our description of dengue virus transmission dynamics is unprecedented in detail, providing a basis for understanding the persistence of this rapidly emerging pathogen and improving disease prevention programs.
机译:传染病模型在公共卫生规划中发挥着关键作用。这些模型依赖于诸如感染力(FOI)的关键传输参数的准确估计,这是受敏感人的人均风险。 FOI捕获了传输的基本动态,对测量控制工作来说至关重要,例如识别疫苗接种目标。登革热病毒(Denv)是一种蚊子,多相型病原体,目前每年感染3.9亿人。丹佛FOI的现有估计是不准确的,因为它们依靠风险随着时间的不切实际的假设。因此,登录模型对于设计疫苗部署策略是不可靠的。在这里,我们向我们的知识展示了使用基于花键的拟合程序的第一次变化(每日),血清型特异性估算,旨在检查来自秘鲁Iquitos的12-Y,纵向Denv血清学数据集(11,703个个人, 1999年至2010年的38,416个样本和22,301种特异性血清感染)。每年丹参的丹参横跨时间和血清型(0-0.33),如每日基本生殖数字(0.49-4.72)。在特定时间段期间,FOI波动横跨血清型相关,表明不同的DENV血清型共享公共传输驱动程序。我们检测到的传输强度的明显变化表明,基于FOI的一次性估计的干预目标可以低估预防疾病所需的努力程度。我们对登革热病毒传播动力学的描述详细介绍,为理解这种快速新兴病原体和改善疾病预防计划的持续性提供了依据。

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