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Development and analytical validation of real-time PCR for the detection of Streptococcus agalactiae in pregnant women

机译:实时PCR检测孕妇中链球菌胆碱的发展及分析验证

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摘要

Abstract Background Group B Streptococcus (GBS) is the leading cause of invasive neonatal infection. In this study, we aimed to evaluate the analytical validation of qualitative real-time polymerase chain reaction (qPCR) as a means to detect GBS. Methods Genomic DNA (gDNA) was purified from 12 ATCC bacterial strains, two belonging to GBS and the remainder acting as negative controls. Additionally, gDNA was isolated from 21 strains of GBS from various serotypes (Ia, Ib and II-VIII). All gDNA was used to evaluate the analytical validation of the qPCR method employing a specific Taqman probe. Inclusivity, exclusivity, anticipated reportable range, the limit of detection and robustness were evaluated. The methods used are described in international guidelines and other existing reports. The performance of this qPCR method for detecting GBS was compared to other microbiological methods used with vaginal-rectal samples from pregnant women. Results Our qPCR method for detecting GBS was analytically validated. It has a limit of detection of 0.7 GE/μL and 100% analytical specificity. It detects all strains of GBS with the same level of performance as microbiological methods. Conclusion Data suggest that this qPCR method performs adequately as a means to detect GBS in vaginal-rectal swabs from pregnant women.
机译:摘要背景B组链球菌(GBS)是侵袭新生儿感染的主要原因。在这项研究中,我们旨在评估定性实时聚合酶链反应(QPCR)作为检测GBS的手段的分析验证。方法从12个ATCC细菌菌株中纯化基因组DNA(GDNA),其中两种属于GBS和作为阴性对照的剩余部分。另外,从各种血清型(IA,IB和II-VIII)中分离出GDNA从21个GBS菌株中分离出来。所有GDNA均用于评估采用特定Taqman探针的QPCR方法的分析验证。含有,排他性,预期的可报告范围,评估了检测和鲁棒性的极限。使用的方法是在国际指南和其他现有报告中描述的。将该QPCR检测GBS检测方法的性能与来自孕妇的阴道直肠样品一起使用的其他微生物方法进行比较。结果我们在分析验证了我们的QPCR检测GBS方法。它的检测限为0.7Ge /μL和100%的分析特异性。它检测到与微生物方法相同的性能水平的GBS菌株。结论数据表明,这种QPCR方法充分地表现为从孕妇中检测阴道直肠拭子中GBS的手段。

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