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Practical and effective diagnosis of animal anthrax in endemic low-resource settings

机译:流行低资源环境中的动物炭疽实际有效的诊断

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摘要

Anthrax threatens human and animal health, and people's livelihoods in many rural communities in Africa and Asia. In these areas, anthrax surveillance is challenged by a lack of tools for on-site detection. Furthermore, cultural practices and infrastructure may affect sample availability and quality. Practical yet accurate diagnostic solutions are greatly needed to quantify anthrax impacts. We validated microscopic and molecular methods for the detection of Bacillus anthracis in field-collected blood smears and identified alternative samples suitable for anthrax confirmation in the absence of blood smears. We investigated livestock mortalities suspected to be caused by anthrax in northern Tanzania. Field-prepared blood smears (n = 152) were tested by microscopy using four staining techniques as well as polymerase chain reaction (PCR) followed by Bayesian latent class analysis. Median sensitivity (91%, CI 95% [84-96%]) and specificity (99%, CI 95% [96-100%]) of microscopy using azure B were comparable to those of the recommended standard, polychrome methylene blue, PMB (92%, CI 95% [84-97%] and 98%, CI 95% [95-100%], respectively), but azure B is more available and convenient. Other commonly-used stains performed poorly. Blood smears could be obtained for <50% of suspected anthrax cases due to local customs and conditions. However, PCR on DNA extracts from skin, which was almost always available, had high sensitivity and specificity (95%, CI 95% [90-98%] and 95%, CI 95% [87-99%], respectively), even after extended storage at ambient temperature. Azure B microscopy represents an accurate diagnostic test for animal anthrax that can be performed with basic laboratory infrastructure and in the field. When blood smears are unavailable, PCR using skin tissues provides a valuable alternative for confirmation. Our findings lead to a practical diagnostic approach for anthrax in low-resource settings that can support surveillance and control efforts for anthrax-endemic countries globally.
机译:炭疽病威胁着人类和动物健康,以及非洲许多农村社区的人民生计。在这些领域,通过缺乏现场检测的工具,炭疽监测受到挑战。此外,文化措施和基础设施可能会影响样品可用性和质量。非常需要实用但精确的诊断解决方案来量化炭疽病的影响。我们验证了检测芽孢杆菌在现场收集的血液涂片中的微观和分子方法,并确定了在没有血液涂片的情况下适用于炭疽确认的替代样品。我们调查了据坦桑尼亚北部炭疽病患有哺乳的牲畜死亡人数。使用四种染色技术以及聚合酶链式反应(PCR),通过显微镜检查进行现场制备的血液涂片(N = 152),然后通过贝叶斯潜在的阶级分析进行。中值敏感性(91%,CI 95%[84-96%])和使用Azure B的显微镜的特异性(99%,CI 95%[96-100%])与推荐标准,聚氯乙烯蓝色, PMB(92%,CI 95%[84-97%]和98%,CI 95%[95-100%]),但Azure B更可用,方便。其他常用的污渍表现不佳。由于当地海关和条件,可以获得<50%可疑的炭疽病例的血液涂片。然而,来自皮肤的DNA提取物的PCR几乎总是可用的,具有高敏感性和特异性(95%,CI 95%[90-98%]和95%,CI 95%[87-99%],即使在环境温度下延长储存。 Azure B显微镜代表可与基本实验室基础设施和现场进行的动物炭疽准确的诊断测试。当血液涂片不可用时,使用皮肤组织的PCR提供了有价值的确认替代品。我们的调查结果导致低资源环境中炭疽的实用诊断方法,可以支持全球炭疽松流行国家的监视和控制努力。

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