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Diversity and functional analysis of salivary microflora of Indian Antarctic expeditionaries

机译:印度南极探矿唾液微生物的多样性与功能分析

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摘要

Introduction: The human oral microbiota continues to change phenotype by many factors (environment, diet, genetics, stress, etc.), throughout life with a major impact on human physiology, psychology, metabolism and immune system. Amongst one such factor with unique and extreme environmental conditions is Antarctica. The sea voyage to Antarctica has many risks than at station for expedition members. In this study, we investigated the influence of Antarctic sea voyage and stay at the Indian Antarctic station Maitri, on the health of Indian expedition members by using a metagenomic approach to explore oral biodiversity. Methods: Saliva samples were collected from 12 expedition members, at 3 different time points viz. before the start of the ship voyage, after the completion of the voyage and at the end of the stay at Antarctica. Samples were analyzed for whole genome and 16S rRNA sequencing. Result: The oral microbial diversity of the expedition members was significantly changed, during the days of sailing and after the stay at Antarctica. The oral microbiota comprised mainly of the phyla Firmicutes (46%, 29% & 36%); Proteobacteria (40%, 48%, & 44%), Bacteroidetes (10%, 22%, &14%), Fusobacterium and Actinobacteria (5%-1%) and Unclassified (17%, 25% & 23%), at three time points, respectively. Further, the differential analysis of microbes across all the phyla revealed 89, 157 and 157 OTUs genera. The altered microbiota indicated changes in amino acid, lipid and carbohydrate metabolism. Conclusion: Study suggests that understanding the compositional and functional differences in the oral microbiota of Antarctic expedition members, can lay the foundation to relate these differences to their health status. It will further demonstrate the need for providing improved management during ship voyage and stay in Antarctica.
机译:介绍:人口腔微生物群继续改变许多因素(环境,饮食,遗传,压力等)的表型,在整个生命中,对人体生理学,心理学,新陈代谢和免疫系统的重大影响。在一个独特和极端的环境条件的一个这些因素中是南极。海上航行到南极洲的风险高于探险会员的车站。在这项研究中,我们调查了南极海航的影响,并在印度南极站Maitri,通过使用偏见方法来探索口腔生物多样性的印度探险会员的健康。方法:从12个探险构件中收集唾液样品,3种不同的时间点viz。在船舶开始之前,航程完成后,在南极洲留下的终点。分析样品以针对全基因组和16S rRNA测序分析。结果:在帆船的日子和留在南极洲时,探险会员的口腔微生物多样性显着变化。口腔微生物,主要包含诸至耕地性(46%,29%&36%);诱导型(40%,48%,44%),菌骨(10%,22%,14%),血管杆菌和抗菌菌(5%-1%)和未分类(17%,25%和23%),三时间点分别。此外,微生物跨越所有Phy1的差异分析显示为89,157和157 oTus属。改变的微生物群表明氨基酸,脂质和碳水化合物代谢的变化。结论:研究表明,了解南极探险会员口腔微生物群的组建和功能差,可以将这些差异与其健康状况相关联。它将进一步展示在船舶航行期间提供改进管理并留在南极洲的必要性。

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