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Use of a recombinase polymerase amplification commercial kit for rapid visual detection of Pasteurella multocida

机译:用于快速视觉检测的重组酶聚合酶扩增商用试剂盒的使用

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摘要

Abstract Background Pasteurella multocida (P. multocida) is a bacterium that causes bovine respiratory disease (BRD) and haemorrhagic septicaemia (HS) in cattle, buffaloes and bison. Rapid point-of-care diagnosis or regular testing of Pasteurellosis, therefore, could contribute greatly to early detection, and screening infected animal is important. Up to now, there are no published reports on the use of recombinase polymerase amplification (RPA) combined with a lateral flow dipstick (LFD) for P. multocida detection. Results This study proposes a promising isothermal detection method for P. multocida with the potential to be developed as an on-site test for Pasteurellosis. The method includes an RPA combined with LFD. First, the analytical sensitivity and specificity of P. multocida RPA-LFD were tested. The RPA-LFD, performed at 39 °C, successfully detected P. multocida DNA in 30 min, with a detection limit of up to 120 copies per reaction. Then, the practicability of RPA-LFD was analysed using 62 nasal swabs and 33 fresh lungs samples from 17 different dairy farms. Compared to real-time quantitative PCR (qPCR), the RPA-LFD assay yielded a clinical specificity of 95.15%, positive predictive value (PPV) of 95.15% and 0.958 kappa coefficient. Compared with the culture method, it achieved 100% sensitivity, 67.20% specificity and a 0.572 kappa coefficient. Conclusions These results combined with the simple conditions required for the performance of the RPA-LFD assay, have demonstrated the effectiveness and practicability of the method for development into a regular on-site protocol for the diagnosis of Pasteurellosis.
机译:摘要背景帕斯特尿菌(P. multocida)是一种细菌,导致牛,水牛和野牛的牛呼吸道疾病(BRD)和出血性败血症(HS)。因此,快速的护理诊断或常规测试巴斯特胡萝卜素可能会对早期检测产生贡献,并且筛查感染的动物是重要的。到目前为止,没有关于使用重组酶聚合酶扩增(RPA)的公开报道与P. Multocida检测的横向流量Dipstick(LFD)组合使用。结果本研究提出了对P. Multocida的有前途的等温检测方法,潜力是作为巴斯特脲症的现场测试。该方法包括与LFD结合的RPA。首先,测试P. Multocida RPA-LFD的分析敏感性和特异性。在39℃下进行的RPA-LFD在30分钟内成功地检测到P. Multocada DNA,检测限度为每次反应最多120份。然后,使用62个鼻拭子和来自17个不同乳制品农场的33个新鲜肺样品分析RPA-LFD的实用性。与实时定量PCR(QPCR)相比,RPA-LFD测定产生临床特异性为95.15%,阳性预测值(PPV)为95.15%和0.958 kappa系数。与培养方法相比,它达到了100%的灵敏度,特异性为67.20%和0.572 kappa系数。结论这些结果与RPA-LFD测定表现所需的简单条件相结合,已经证明了该方法对常规现场方案进行诊断的常规现场方案的有效性和实用性。

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