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Recalibration of mapping quality scores in Illumina short-read alignments improves SNP detection results in low-coverage sequencing data

机译：Illumina短读取对准中的映射质量评分的重新校准改善了低覆盖量测序数据的SNP检测结果

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Eliot Cline; Nuttachat Wisittipanit; Tossapon Boongoen; Ekachai Chukeatirote; Darush Struss; Anant Eungwanichayapant;
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年度 2020
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1. Probabilistic alignments with quality scores: an application to short-read mapping toward accurate SNP/indel detection [J] . Hamada Michiaki, Wijaya Edward, Frith Martin C., Bioinformatics . 2011,第22期

机译：质量得分的概率比对：短读映射向准确SNP /插入缺失检测的应用
2. Probabilistic alignments with quality scores: an application to short-read mapping toward accurate SNP/indel detection [J] . Kiyoshi Asai Bioinformatics . 2011,第22期

机译：质量得分的概率比对：短读映射向准确SNP /插入缺失检测的应用
3. Performance comparison of SNP detection tools with illumina exome sequencing data—an assessment using both family pedigree information and sample-matched SNP array data [J] . Electron Kebebew, Li Jia, Mei He, Nucleic acids research . 2014,第12期

机译：具有照明外显子组测序数据的SNP检测工具的性能比较-使用家谱信息和与样品匹配的SNP阵列数据进行评估
4. Workshop: Calling Structural Variation with low-coverage sequencing data by mapping to focal region [C] . Jin Zhang, Yufeng Wu Computational Advances in Bio and Medical Sciences (ICCABS), 2012 IEEE 2nd International Conference on . 2012

机译：讲习班：通过映射到焦点区域来利用低覆盖率测序数据调用结构变异
5. Statistical Methods for Chip-Exo/Nexus Quality Control, and Fine-mapping of Multi-trait SNPs in High LD by Using Next-generation Sequencing Data [D] . Welch, Rene 2018

机译：使用下一代测序数据进行Chip-Exo / Nexus质量控制和高LD中多特征SNP精细映射的统计方法
6. Performance comparison of SNP detection tools with illumina exome sequencing data—an assessment using both family pedigree information and sample-matched SNP array data [O] . Ming Yi, Yongmei Zhao, Li Jia, 2014

机译：具有照明外显子组测序数据的SNP检测工具的性能比较-使用家谱信息和与样品匹配的SNP阵列数据进行评估
7. Probabilistic alignments with quality scores: an application to short-read mapping toward accurate SNP/indel detection [O] . Michiaki Hamada, Edward Wijaya, Martin C. Frith, 2011

机译：具有质量分数的概率对齐：用于简短读取映射朝向精确的SNP / indel检测的应用

Recalibration of mapping quality scores in Illumina short-read alignments improves SNP detection results in low-coverage sequencing data

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