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Systematic Biology

【机译】：系统生物学

ISSN：-
出版周期：Six no. a year, 2001-
语言：English

起始发布年份：1992
出版者：Washington, D.C., USA : Society of Systematic Biologists, [1992-
出版地：England

NLM刊名缩写：Syst Biol

数据库引入：PubMed: v46n1, Mar. 1997-

MeSH词表主题词：Biology*; Biology/classification*

备注：Title from cover. Imprint varies. Also issued online.展开▼

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1.EPA-ng: Massively Parallel Evolutionary Placement of Genetic Sequences

机译：EPA-ng：遗传序列的大规模并行进化布局
- 作者：Pierre Barbera;Alexey M Kozlov;Lucas Czech;Benoit Morel;Diego Darriba;Tomáš Flouri;Alexandros Stamatakis
- 期刊名称：《Systematic Biology》
- Metabarcoding metagenomics microbiome phylogenetics phylogenetic placement;
2.Full Bayesian Comparative Phylogeography from Genomic Data

机译：来自基因组数据的完整贝叶斯比较系统记录
- 作者：Jamie R Oaks
- 期刊名称：《Systematic Biology》
- Bayesian model choice biogeography Dirichlet process prior phylogeography;
3.The Spectre of Too Many Species

机译：太多物种的幽灵
- 作者：Adam D Leaché;Tianqi Zhu;Bruce Rannala;Ziheng Yang
- 期刊名称：《Systematic Biology》
- bpp multispecies coalescent Species delimitation taxonomy;
4.Early Arrival and Climatically-Linked Geographic Expansion of New World Monkeys from Tiny African Ancestors

机译：来自微小非洲祖先的新世界猴的早期到达和与气候相关的地理扩展
- 作者：Daniele Silvestro;Marcelo F Tejedor;Martha L Serrano-Serrano;Oriane Loiseau;Victor Rossier;Jonathan Rolland;Alexander Zizka;Sebastian Höhna;Alexandre Antonelli;Nicolas Salamin
- 期刊名称：《Systematic Biology》
- Trait evolution primates birth-death models Bayesian methods fossils;
5.Distinguishing Between Convergent Evolution and Violation of the Molecular Clock for Three Taxa

机译：区分演化和违反三个类群的分子钟。
- 作者：Jonathan D Mitchell;Jeremy G Sumner;Barbara R Holland
- 期刊名称：《Systematic Biology》
6.HyDe: A Python Package for Genome-Scale Hybridization Detection

机译：HyDe：用于基因组规模杂交检测的Python包
- 作者：Paul D Blischak;Julia Chifman;Andrea D Wolfe;Laura S Kubatko
- 期刊名称：《Systematic Biology》
- ABBA-BABA coalescence gene flow hybridization phylogenetic invariants;
7.Dating the Species Network: Allopolyploidy and Repetitive DNA Evolution in American Daisies (Melampodium sect. Melampodium Asteraceae)

机译：约会物种网络：美国雏菊（Melampodium sect。MelampodiumAsteraceae）的同种多倍体和重复DNA进化
- 作者：Jamie Mccann;Tae-Soo Jang;Jiři Macas;Gerald M Schneeweiss;Nicholas J Matzke;Petr Novák;Tod F Stuessy;José L Villaseñor;Hanna Weiss-Schneeweiss
- 期刊名称：《Systematic Biology》
- Allopolyploidy divergence time estimation Melampodium phylogenetics repetitive DNA evolution species network;
8.Comparison of Methods for Molecular Species Delimitation Across a Range of Speciation Scenarios

机译：跨物种情景的分子物种划界方法的比较
- 作者：Arong Luo;Cheng Ling;Simon Y W Ho;Chao-Dong Zhu
- 期刊名称：《Systematic Biology》
- Molecular species delimitation speciation multispecies coalescent simulation generalized mixed Yule-coalescent Poisson tree processes Bayesian phylogenetics;
9.Modeling the Growth and Decline of Pathogen Effective Population Size Provides Insight into Epidemic Dynamics and Drivers of Antimicrobial Resistance

机译：对病原体有效种群大小的增长和下降进行建模可以深入了解流行病动力学和抗菌素耐药性的驱动因素
- 作者：Erik M Volz;Xavier Didelot
- 期刊名称：《Systematic Biology》
- Antimicrobial resistance effective population size growth rate MRSA phylodynamics skygrowth;
10.Information Criteria for Comparing Partition Schemes

机译：比较分区方案的信息标准
- 作者：Tae-Kun Seo;Jeffrey L Thorne
- 期刊名称：《Systematic Biology》
- AIC BIC information criteria model comparison multilocus analysis partition scheme comparison phylogenomics;
11.Using Phylogenomic Data to Explore the Effects of Relaxed Clocks and Calibration Strategies on Divergence Time Estimation: Primates as a Test Case

机译：使用植物统计学数据探索放宽时钟和校准策略对发散时间估计的影响：灵长类动物作为测试案例
- 作者：Mario Dos Reis;Gregg F Gunnell;Jose Barba-Montoya;Alex Wilkins;Ziheng Yang;Anne D Yoder
- 期刊名称：《Systematic Biology》
- Bayes factors Bayesian analysis fossil molecular dating phylogenomic analysis Primates relaxed clock;
12.Automated Integration of Trees and Traits: A Case Study Using Paired Fin Loss Across Teleost Fishes

机译：树木和性状的自动整合：以硬骨鱼类成对鳍损失为例的案例研究
- 作者：Laura M Jackson;Pasan C Fernando;Josh S Hanscom;James P Balhoff;Paula M Mabee
- 期刊名称：《Systematic Biology》
- Ancestral state reconstruction bioinformatics pipeline evolutionary morphology fishes inference missing data ontology paired fins phenotype;
13.Complex Models of Sequence Evolution Require Accurate Estimators as Exemplified with the Invariable Site Plus Gamma Model

机译：序列演化的复杂模型需要精确的估计量如不变位点加伽玛模型所举例说明的
- 作者：Lam-Tung Nguyen;Arndt von Haeseler;Bui Quang Minh
- 期刊名称：《Systematic Biology》
- Gamma model invariable sites maximum likelihood phylogenetic inference rate heterogeneity among sites;
14.Corrigendum to: Probabilistic Distances Between Trees

机译：更正为：树之间的概率距离
- 期刊名称：《Systematic Biology》
15.A Two-State Model of Tree Evolution and Its Applications to Alu Retrotransposition

机译：树演化的两态模型及其在Alu逆转置中的应用
- 作者：Niema Moshiri;Siavash Mirarab
- 期刊名称：《Systematic Biology》
- Alu evolution model retrotransposition;
16.Estimating Age-Dependent Extinction: Contrasting Evidence from Fossils and Phylogenies

机译：估计与年龄有关的物种灭绝：来自化石和系统发育学的相反证据
- 作者：Oskar Hagen;Tobias Andermann;Tiago B Quental;Alexandre Antonelli;Daniele Silvestro
- 期刊名称：《Systematic Biology》
- Age-dependent extinction diversification macroevolution PyRate Bayesian inference;
17.The Efficacy of Consensus Tree Methods for Summarizing Phylogenetic Relationships from a Posterior Sample of Trees Estimated from Morphological Data

机译：共识树方法从形态数据估计的后树样本中总结系统发生关系的功效
- 作者：Joseph E O’Reilly;Philip C J Donoghue
- 期刊名称：《Systematic Biology》
- Bayesian phylogenetics consensus trees divergence time estimation total-evidence dating morphology;
18.Probabilistic Distances Between Trees

机译：树之间的概率距离
- 作者：Maryam K Garba;Tom M W Nye;Richard J Boys
- 期刊名称：《Systematic Biology》
19.An Evaluation of Different Partitioning Strategies for Bayesian Estimation of Species Divergence Times

机译：贝叶斯物种扩散时间估计的不同划分策略的评估
- 作者：Konstantinos Angelis;Sandra Álvarez-Carretero;Mario Dos Reis;Ziheng Yang
- 期刊名称：《Systematic Biology》
- Bayesian inference genomic data infinite-sites theory molecular clock dating partition analysis;
20.Taming the BEAST—A Community Teaching Material Resource for BEAST 2

机译：驯服BEAST-BEAST 2的社区教材资源
- 作者：Joëlle Barido-Sottani;Veronika Bošková;Louis Du Plessis;Denise Kühnert;Carsten Magnus;Venelin Mitov;Nicola F. Müller;Jūlija PečErska;David A. Rasmussen;Chi Zhang;Alexei J. Drummond;Tracy A. Heath;Oliver G. Pybus;Timothy G. Vaughan;Tanja Stadler
- 期刊名称：《Systematic Biology》
- Bayesian inference MCMC phylodynamics phylogenetics;
21.Conserved Nonexonic Elements: A Novel Class of Marker for Phylogenomics

机译：保守的非xoniconic元素：新型的植物药理标记
- 作者：Scott V. Edwards;Alison Cloutier;Allan J. Baker
- 期刊名称：《Systematic Biology》
- Biased-gene conversion conserved element incomplete lineage sorting intron multispecies coalescent;
22.More on the Best Evolutionary Rate for Phylogenetic Analysis

机译：有关系统发育分析的最佳进化速率的更多信息
- 作者：Seraina Klopfstein;Tim Massingham;Nick Goldman
- 期刊名称：《Systematic Biology》
- Experimental design phylogenomics;
23.Combined Analysis of Extant Rhynchonellida (Brachiopoda) using Morphological and Molecular Data

机译：利用形态学和分子学数据对现存的龙须藻进行综合分析
- 作者：David W. Bapst;Holly A. Schreiber;Sandra J. Carlson
- 期刊名称：《Systematic Biology》
- Brachiopoda combined analyses morphology paleontology phylogenetics;
24.Dental Data Perform Relatively Poorly in Reconstructing Mammal Phylogenies: Morphological Partitions Evaluated with Molecular Benchmarks

机译：牙科数据在重建哺乳动物系统发育方面相对较差：用分子基准评估的形态分区
- 作者：Robert S. Sansom;Matthew Albion Wills;Tamara Williams
- 期刊名称：《Systematic Biology》
25.Phylogenomics using Target-Restricted Assembly Resolves Intrageneric Relationships of Parasitic Lice (Phthiraptera: Columbicola)

机译：使用靶标限制装配的植物药理学解决了寄生虱的属内关系（Phthiraptera：Columbicola）
- 作者：Bret M. Boyd;Julie M. Allen;Nam-Phuong Nguyen;Andrew D. Sweet;Tandy Warnow;Michael D. Shapiro;Scott M. Villa;Sarah E. Bush;Dale H. Clayton;Kevin P. Johnson
- 期刊名称：《Systematic Biology》
26.Is BAMM Flawed? Theoretical and Practical Concerns in the Analysis of Multi-Rate Diversification Models

机译：BAMM有缺陷吗？多比率多元化模型分析中的理论和实践问题
- 作者：Daniel L. Rabosky;Jonathan S. Mitchell;Jonathan Chang
- 期刊名称：《Systematic Biology》
- BAMM diversification macroevolution phylogeny speciation;
27.Special Issue: Mathematical and Computational Evolutionary Biology—2015

机译：特刊：数学与计算进化生物学2015年
- 作者：David Bryant;Olivier Gascuel
- 期刊名称：《Systematic Biology》
28.Split Scores: A Tool to Quantify Phylogenetic Signal in Genome-Scale Data

机译：拆分分数：一种用于量化基因组规模数据中系统发生信号的工具
- 作者：Elizabeth S. Allman;Laura S. Kubatko;John A. Rhodes
- 期刊名称：《Systematic Biology》
- General Markov model genome-scale data analysis matrix flattenings phylogenetic trees singular value decomposition split scores;
29.Homology-Aware Phylogenomics at Gigabase Scales

机译：千兆位尺度的同源同源系统
- 作者：M. J. Sanderson;Marius Nicolae;M. M. McMahon
- 期刊名称：《Systematic Biology》
- k-mer lineage sorting Oryza phylogenomics suffix array;
30.Erratum

机译：勘误表
- 期刊名称：《Systematic Biology》
31.Infomap Bioregions: Interactive Mapping of Biogeographical Regions from Species Distributions

机译：Infomap Bioregions：根据物种分布对生物地理区域进行交互式映射
- 作者：Daniel Edler;Thaís Guedes;Alexander Zizka;Martin Rosvall;Alexandre Antonelli
- 期刊名称：《Systematic Biology》
- Biogeography bioregionalization conservation mapping;
32.Fundamentals and Recent Developments in Approximate Bayesian Computation

机译：贝叶斯近似计算的基本原理和最新发展
- 作者：Jarno Lintusaari;Michael U. Gutmann;Ritabrata Dutta;Samuel Kaski;Jukka Corander
- 期刊名称：《Systematic Biology》
33.Statistical Inference in the Wright–Fisher Model Using Allele Frequency Data

机译：Wright-Fisher模型中使用等位基因频率数据的统计推断
- 作者：Paula Tataru;Maria Simonsen;Thomas Bataillon;Asger Hobolth
- 期刊名称：《Systematic Biology》
34.SpeciesGeoCoder: Fast Categorization of Species Occurrences for Analyses of Biodiversity Biogeography Ecology and Evolution

机译：SpeciesGeoCoder：对物种发生的快速分类以分析生物多样性生物地理学生态学和进化
- 作者：Mats Töpel;Alexander Zizka;Maria Fernanda Calió;Ruud Scharn;Daniele Silvestro;Alexandre Antonelli
- 期刊名称：《Systematic Biology》
- ancestral area reconstruction biodiversity patterns ecology evolution point in polygon species distribution data;
35.Bayesian Total-Evidence Dating Reveals the Recent Crown Radiation of Penguins

机译：贝叶斯全证据约会揭示了企鹅最近的冠辐射
- 作者：Alexandra Gavryushkina;Tracy A. Heath;Daniel T. Ksepka;Tanja Stadler;David Welch;Alexei J. Drummond
- 期刊名称：《Systematic Biology》
36.Understanding Past Population Dynamics: Bayesian Coalescent-BasedModeling with Covariates

机译：了解过去的人口动态：基于贝叶斯联盟的用协变量建模
- 作者：Mandev S. Gill;Philippe Lemey;Shannon N. Bennett;Roman Biek;Marc A. Suchard
- 期刊名称：《Systematic Biology》
37.Emerging Concepts of Data Integration in Pathogen Phylodynamics

机译：病原体动力学中数据集成的新兴概念
- 作者：Guy Baele;Marc A. Suchard;Andrew Rambaut;Philippe Lemey
- 期刊名称：《Systematic Biology》
38.Erratum

机译：勘误表
- 期刊名称：《Systematic Biology》
39.Biogeographic Dating of Speciation Times Using Paleogeographically Informed Processes

机译：使用古地理信息过程对物种形成时间进行生物地理约会
- 作者：Michael J. Landis
- 期刊名称：《Systematic Biology》
- biogeography phylogenetics paleogeography tree-dating Testudines Bayesian;
40.Terrace Aware Data Structure for Phylogenomic Inference from Supermatrices

机译：梯田感知数据结构用于从超矩阵推理
- 作者：Olga Chernomor;Arndt von Haeseler;Bui Quang Minh
- 期刊名称：《Systematic Biology》
- Maximum likelihood partial terraces partition models phylogenetic terraces phylogenomic inference;
41.Two Influential Primate Classifications Logically Aligned

机译：两种有影响力的灵长类分类在逻辑上对齐
- 作者：Nico M. Franz;Naomi M. Pier;Deeann M. Reeder;Mingmin Chen;Shizhuo Yu;Parisa Kianmajd;Shawn Bowers;Bertram Ludäscher
- 期刊名称：《Systematic Biology》
- Alignment classification concept taxonomy logic ontology Primates reasoning Region Connection Calculus;
42.Does Gene Tree Discordance Explain the Mismatch between Macroevolutionary Models and Empirical Patterns of Tree Shape and Branching Times?

机译：基因树不一致是否说明宏观进化模型与树形和分支时间的经验模式之间的不匹配？
- 作者：Tanja Stadler;James H. Degnan;Noah A. Rosenberg
- 期刊名称：《Systematic Biology》
- Birth–death process genealogy multispecies coalescent phylogeny;
43.Taxonomist’s Nightmare … Evolutionist’s Delight : An Integrative Approach Resolves Species Limits in Jumping Bristletails Despite Widespread Hybridization and Parthenogenesis

机译：分类学家的噩梦……进化论者的喜悦：尽管杂交和孤雌生殖得到了广泛的应用但综合方法解决了跳跃猪鬃的物种限制
- 作者：Thomas Dejaco;Melitta Gassner;Wolfgang Arthofer;Birgit C. Schlick-Steiner;Florian M. Steiner
- 期刊名称：《Systematic Biology》
- Archaeognatha gene tree discordance hybrid speciation hybrid swarm incomplete lineage sorting mitochondrial introgression new species new synonyms;
44.Computational Performance and Statistical Accuracy of *BEAST and Comparisons with Other Methods

机译：* BEAST的计算性能和统计精度以及与其他方法的比较
- 作者：Huw A. Ogilvie;Joseph Heled;Dong Xie;Alexei J. Drummond
- 期刊名称：《Systematic Biology》
- Bayesian phylogenetics Concatenation Gene tree Multispecies coalescent Phylogenomics Species tree Supermatrix;
45.Detecting the Anomaly Zone in Species Trees and Evidence for a Misleading Signal in Higher-Level Skink Phylogeny (Squamata: Scincidae).

机译：在物种树的异常区域中检测异常信号并在高层石龙系统发育学（鳞茎：Sc科）中发现误导性信号的证据。
- 作者：Charles W. Linkem;Vladimir N. Minin;Adam D. Leaché
- 期刊名称：《Systematic Biology》
- Anomalous gene trees IDBA incomplete lineage sorting phylogenetics probes sequence capture ultraconserved elements UCE;
46.The Phylogeny of Rickettsia Using Different Evolutionary Signatures: How Tree-Like is Bacterial Evolution?

机译：立克次体的系统发育使用不同的进化特征：细菌进化如何像树一样？
- 作者：Gemma G. R. Murray;Lucy A. Weinert;Emma L. Rhule;John J. Welch
- 期刊名称：《Systematic Biology》
- Gene tree discordance genome reduction horizontal gene transfer systematic error reticulate evolution;
47.Erratum

机译：勘误表
- 期刊名称：《Systematic Biology》
48.Genealogical Working Distributions for Bayesian Model Testing with Phylogenetic Uncertainty

机译：系统发育不确定性贝叶斯模型测试的家谱工作分布
- 作者：Guy Baele;Philippe Lemey;Marc A. Suchard
- 期刊名称：《Systematic Biology》
- Bayes factor Bayesian inference coalescent model marginal likelihood MCMC phylogenetics Working distribution;
49.SimPhy: Phylogenomic Simulation of Gene Locus and Species Trees

机译：SimPhy：基因基因座和物种树的系统进化模拟
- 作者：Diego Mallo;Leonardo De Oliveira Martins;David Posada
- 期刊名称：《Systematic Biology》
- Gene conversion gene duplication and loss gene family evolution horizontal gene transfer incomplete lineage sorting locus tree simulation species tree;
50.Total-Evidence Dating under the Fossilized Birth–Death Process

机译：僵化的生死过程中的全证据约会
- 作者：Chi Zhang;Tanja Stadler;Seraina Klopfstein;Tracy A. Heath;Fredrik Ronquist
- 期刊名称：《Systematic Biology》
- Bayesian phylogenetic inference birth–death process MCMC relaxed clock total-evidence dating tree prior;
51.Processes Driving the Adaptive Radiation of a Tropical Tree (Diospyros Ebenaceae) in New Caledonia a Biodiversity Hotspot

机译：驱动热带树适应性辐射的过程（柿属Ebenaceae）在新喀里多尼亚一个生物多样性热点
- 作者：Ovidiu Paun;Barbara Turner;Emiliano Trucchi;Jérôme Munzinger;Mark W. Chase;Rosabelle Samuel
- 期刊名称：《Systematic Biology》
- Adaptive radiation Diospyros hybridization New Caledonia RAD-sequencing soil adaptation;
52.Quantifying Age-dependent Extinction from Species Phylogenies

机译：从物种系统发育中量化年龄相关的灭绝
- 作者：Helen K. Alexander;Amaury Lambert;Tanja Stadler
- 期刊名称：《Systematic Biology》
- Aves coalescent point process diversification macroevolution maximum likelihood estimation phylogenetics Solanaceae;
53.Inferring Speciation Processes from Patterns of Natural Variation in Microbial Genomes

机译：从微生物基因组的自然变异模式推断物种形成过程
- 作者：David J. Krause;Rachel J. Whitaker
- 期刊名称：《Systematic Biology》
- Barriers to gene flow differentiation recombination selection;
54.Historical Biogeography Using Species Geographical Ranges

机译：使用物种地理范围的历史生物地理学
- 作者：Ignacio Quintero;Petr Keil;Walter Jetz;Forrest W. Crawford
- 期刊名称：《Systematic Biology》
- Bayesian inference continuous trait evolution diversification historical biogeography phylogeography species distributions;
55.Phylogenetic ANOVA: The Expression Variance and Evolution Model for Quantitative Trait Evolution

机译：系统发生方差分析：数量性状进化的表达方差和进化模型
- 作者：Rori V. Rohlfs;Rasmus Nielsen
- 期刊名称：《Systematic Biology》
- Comparative expression expression adaptation Ornstein–Uhlenbeck model plasticity population variance;
56.Short Tree Long Tree Right Tree Wrong Tree: New Acquisition Bias Corrections for Inferring SNP Phylogenies

机译：短树长树正确的树错误的树：用于推断SNP系统发育的新采集偏差校正
- 作者：Adam D. Leaché;Barbara L. Banbury;Joseph Felsenstein;Adrián nieto-Montes de Oca;Alexandros Stamatakis
- 期刊名称：《Systematic Biology》
- Conditional likelihood ddRADseq maximum likelihood Phrynosoma Phrynosomatidae reconstituted DNA SVDquartets;
57.PoMo: An Allele Frequency-Based Approach for Species Tree Estimation

机译：PoMo：基于等位基因频率的物种树估计方法
- 作者：Nicola De Maio;Dominik Schrempf;Carolin Kosiol
- 期刊名称：《Systematic Biology》
- Incomplete lineage sorting Phylogenetics PoMo Species tree;
58.Resolving Evolutionary Relationships in Closely Related Species with Whole-Genome Sequencing Data

机译：利用全基因组测序数据解决密切相关物种的进化关系
- 作者：Alexander Nater;Reto Burri;Takeshi Kawakami;Linnéa Smeds;Hans Ellegren
- 期刊名称：《Systematic Biology》
- Approximate Bayesian computation demographic modeling gene flow gene tree incomplete lineage sorting introgression phylogenomics species tree;
59.Species Selection Favors Dispersive Life Histories in Sea Slugs but Higher Per-Offspring Investment Drives Shifts to Short-Lived Larvae

机译：物种选择有利于海Sl的分散生活史但较高的后代投资促使转向短命幼虫
- 作者：Patrick J. Krug;Jann E. Vendetti;Ryan A. Ellingson;Cynthia D. Trowbridge;Yayoi M. Hirano;Danielle Y. Trathen;Albert K. Rodriguez;Cornelis Swennen;Nerida G. Wilson;Ángel A. Valdés
- 期刊名称：《Systematic Biology》
- Development mode gastropod lecithotrophy macroevolution planktotrophy Sacoglossa species selection;
60.Which Phylogenetic Networks are Merely Trees with Additional Arcs?

机译：哪些系统发育网络是仅带有附加弧的树？
- 作者：Andrew R. Francis;Mike Steel
- 期刊名称：《Systematic Biology》
- Algorithm Antichain Phylogenetic network phylogenetic tree reticulate evolution 2-SAT;
61.Species-Level Phylogeny and Polyploid Relationships in Hordeum (Poaceae) Inferred by Next-Generation Sequencing and In Silico Cloning of Multiple Nuclear Loci

机译：下一代测序和多个核基因座的计算机克隆克隆推断大麦（禾本科）的物种水平系统发育和多倍体关系。
- 作者：Jonathan Brassac;Frank R. Blattner
- 期刊名称：《Systematic Biology》
- Evolution Hordeum in silico cloning multispecies coalescent nuclear single-copy genes phylogeny polyploidy systematics;
62.Current Methods for Automated Filtering of Multiple Sequence Alignments Frequently Worsen Single-Gene Phylogenetic Inference

机译：当前用于自动过滤多个序列比对的方法经常会恶化单基因系统发生推断
- 作者：Ge Tan;Matthieu Muffato;Christian Ledergerber;Javier Herrero;Nick Goldman;Manuel Gil;Christophe Dessimoz
- 期刊名称：《Systematic Biology》
- alignment filtering alignment trimming molecular phylogeny multiple sequence alignment phylogeny phylogenetic inference phylogenetics;
63.Toward Synthesizing Our Knowledge of Morphology: Using Ontologies and Machine Reasoning to Extract Presence/Absence Evolutionary Phenotypes across Studies

机译：致力于综合我们的形态学知识：使用本体论和机器推理来提取研究中存在/不存在的进化表型
- 作者：T. Alexander Dececchi;James P. Balhoff;Hilmar Lapp;Paula M. Mabee
- 期刊名称：《Systematic Biology》
- character conflict evolutionary mapping inference missing data morphological character ontology phenotype supermatrix;
64.A Falsification of the Citation Impediment in the Taxonomic Literature

机译：分类文献中的引用障碍的证伪
- 作者：Florian M. Steiner;Marco Pautasso;Herbert Zettel;Karl Moder;Wolfgang Arthofer;Birgit C. Schlick-Steiner
- 期刊名称：《Systematic Biology》
- Animals citations impact factor microorganisms plants scientometrics taxonomic impediment taxonomy;
65.Age-Dependent Speciation Can Explain the Shape of Empirical Phylogenies

机译：年龄相关的物种可以解释经验系统发育的形状
- 作者：Oskar Hagen;Klaas Hartmann;Mike Steel;Tanja Stadler
- 期刊名称：《Systematic Biology》
- Birth–death process diversification macroevolution Stochastic models;
66.Multilocus Species Trees Show the Recent Adaptive Radiation of the Mimetic Heliconius Butterflies

机译：多基因种树显示了模仿的Heliconius蝴蝶的最新自适应辐射。
- 作者：Krzysztof M. Kozak;Niklas Wahlberg;Andrew F. E. Neild;Kanchon K. Dasmahapatra;James Mallet;Chris D. Jiggins
- 期刊名称：《Systematic Biology》
- Amazonia diversification rate incongruence Lepidoptera Miocene mimicry multispecies coalescent;
67.Cophylogeny Reconstruction via an Approximate Bayesian Computation

机译：通过近似贝叶斯计算进行的亲缘关系重建
- 作者：C. Baudet;B. Donati;B. Sinaimeri;P. Crescenzi;C. Gautier;C. Matias;M.-F. Sagot
- 期刊名称：《Systematic Biology》
- approximate Bayesian computation cophylogeny host/parasite systems likelihood-free inference;
68.Characterization of the Uncertainty of Divergence Time Estimation under Relaxed Molecular Clock Models Using Multiple Loci

机译：使用多个基因座的弛豫分子时钟模型下发散时间估计的不确定性表征
- 作者：Tianqi Zhu;Mario Dos Reis;Ziheng Yang
- 期刊名称：《Systematic Biology》
- Bayesian inference divergence time finite-sites theory infinite-sites theory posterior variance relaxed clock;
69.Genetic Distance for a General Non-Stationary Markov Substitution Process

机译：一般非平稳马尔可夫置换过程的遗传距离
- 作者：Benjamin D. Kaehler;Von Bing Yap;Rongli Zhang;Gavin A. Huttley
- 期刊名称：《Systematic Biology》
- genetic distance Markov process maximum likelihood molecular clock nonstationary;
70.Consensus and Confusion in Molluscan Trees: Evaluating Morphological and Molecular Phylogenies

机译：软体动物树的共识和混乱：评价形态和分子系统发育。
- 作者：Julia D. Sigwart;David R. Lindberg
- 期刊名称：《Systematic Biology》
- Aculifera Conchifera Mollusca Serialia supertree Testaria;
71.Bias and Sensitivity in the Placement of Fossil Taxa Resulting from Interpretations of Missing Data

机译：遗失数据的解释导致的化石分类位置的偏差和敏感性
- 作者：Robert S. Sansom
- 期刊名称：《Systematic Biology》
- Missing data paleontology phylogeny soft-bodied stem-group taphonomy;
72.Integrating Fossils Phylogenies and Niche Models into Biogeography to Reveal Ancient Evolutionary History: The Case of Hypericum (Hypericaceae)

机译：将化石系统发育和生态位模型整合到生物地理学中以揭示古代进化史：金丝桃属植物（金丝桃科）
- 作者：Andrea S. Meseguer;Jorge M. Lobo;Richard Ree;David J. Beerling;Isabel Sanmartín
- 期刊名称：《Systematic Biology》
- Biogeography Cenozoic climate change environmental niche modeling extinction fossils Hypericum phylogenetics;
73.The Phylogenetic Likelihood Library

机译：系统发生可能性库
- 作者：T. Flouri;F. Izquierdo-Carrasco;D. Darriba;A.J. Aberer;L.-T. Nguyen;B.Q. Minh;A. Von Haeseler;A. Stamatakis
- 期刊名称：《Systematic Biology》
- Maximum likelihood parallel computing phylogenetics;
74.Cancer Evolution: Mathematical Models and Computational Inference

机译：癌症进化：数学模型和计算推断
- 作者：Niko Beerenwinkel;Roland F. Schwarz;Moritz Gerstung;Florian Markowetz
- 期刊名称：《Systematic Biology》
- Cancer cancer progression evolution population genetics probabilistic graphical models;
75.A Bayesian Supertree Model for Genome-Wide Species Tree Reconstruction

机译：全基因组树种重建的贝叶斯Supertree模型
- 作者：Leonardo De Oliveira Martins;Diego Mallo;David Posada
- 期刊名称：《Systematic Biology》
- hierarchical Bayesian model phylogenomics reconciliation supertree tree distance;
76.From Gene Trees to a Dated Allopolyploid Network: Insights from the Angiosperm Genus Viola (Violaceae)

机译：从基因树到陈旧的异源多倍体网络：被子植物中提琴（堇菜科）的见解
- 作者：Thomas Marcussen;Lise Heier;Anne K. Brysting;Bengt Oxelman;Kjetill S. Jakobsen
- 期刊名称：《Systematic Biology》
- Dating low-copy nuclear gene polyploidy species network Viola violaceae;
77.Genomic Repeat Abundances Contain Phylogenetic Signal

机译：基因组重复丰度包含系统发生信号
- 作者：Steven Dodsworth;Mark W. Chase;Laura J. Kelly;Ilia J. Leitch;Jiří Macas;Petr Novák;Mathieu Piednoël;Hanna Weiss-Schneeweiss;Andrew R. Leitch
- 期刊名称：《Systematic Biology》
- Repetitive DNA continuous characters genomics next-generation sequencing phylogenetics molecular systematics;
78.How Much Information is Needed to Infer Reticulate Evolutionary Histories?

机译：推断网状进化史需要多少信息？
- 作者：Katharina T. Huber;Leo Van Iersel;Vincent Moulton;Taoyang Wu
- 期刊名称：《Systematic Biology》
- Evolutionary tree network reconstruction phylogenetic network reticulate evolution;
79.Concatabominations: Identifying Unstable Taxa in Morphological Phylogenetics using a Heuristic Extension to Safe Taxonomic Reduction

机译：共生结合：使用启发式扩展来安全分类学还原以识别形态学上的不稳定分类群
- 作者：Karen Siu-Ting;Davide Pisani;Christopher J. Creevey;Mark Wilkinson
- 期刊名称：《Systematic Biology》
80.Testing for Universal Common Ancestry

机译：测试通用祖先
- 作者：Leonardo de Oliveira Martins;David Posada
- 期刊名称：《Systematic Biology》
81.Bayesian Species Delimitation Can Be Robust to Guide-Tree Inference Errors

机译：贝叶斯物种定界对于引导树推断错误可能是鲁棒的
- 作者：Chi Zhang;Bruce Rannala;Ziheng Yang
- 期刊名称：《Systematic Biology》
82.Unsorted Homology within Locus and Species Trees

机译：所在地树种中的未分类同源性
- 作者：Diego Mallo;Leonardo de Oliveira Martins;David Posada
- 期刊名称：《Systematic Biology》
- homology incomplete lineage sorting gene duplication and loss gene family locus tree species tree;
83.The Inference of Gene Trees with Species Trees

机译：基因树与物种树的推论
- 作者：Gergely J. Szöllősi;Eric Tannier;Vincent Daubin;Bastien Boussau
- 期刊名称：《Systematic Biology》
- Algorithm amalgamation Bayesian inference birth–death model coalescent dynamic programming gene duplication gene loss gene transfer gene tree hybridization maximum likelihood phylogenetics species tree;
84.Probabilistic Graphical Model Representation in Phylogenetics

机译：系统发育学中的概率图形模型表示
- 作者：Sebastian Höhna;Tracy A. Heath;Bastien Boussau;Michael J. Landis;Fredrik Ronquist;John P. Huelsenbeck
- 期刊名称：《Systematic Biology》
85.Ribosomal DNA Sequence Heterogeneity Reflects Intraspecies Phylogenies and Predicts Genome Structure in Two Contrasting Yeast Species

机译：核糖体DNA序列异质性反映了种内系统发育并预测了两种不同酵母物种的基因组结构。
- 作者：Claire West;Stephen A. James;Robert P. Davey;Jo Dicks;Ian N. Roberts
- 期刊名称：《Systematic Biology》
86.Inferring Heterogeneous Evolutionary Processes Through Time: from Sequence Substitution to Phylogeography

机译：通过时间推断异质进化过程：从序列替代到植物谱学
- 作者：Filip Bielejec;Philippe Lemey;Guy Baele;Andrew Rambaut;Marc A. Suchard
- 期刊名称：《Systematic Biology》
87.On the Biogeography of Centipeda: A Species-Tree Diffusion Approach

机译：enti的生物地理学：一种物种-树扩散方法
- 作者：Stephan Nylinder;Philippe Lemey;Mark De Bruyn;Marc A. Suchard;Bernard E. Pfeil;Neville Walsh;Arne A. Anderberg
- 期刊名称：《Systematic Biology》
- Australia BEAST biogeography Centipeda continuous diffusion Pliocene species-tree;
88.Posterior Predictive Bayesian Phylogenetic Model Selection

机译：后验贝叶斯系统进化模型选择
- 作者：Paul O. Lewis;Wangang Xie;Ming-Hui Chen;Yu Fan;Lynn Kuo
- 期刊名称：《Systematic Biology》
89.When Outgroups Fail; Phylogenomics of Rooting the Emerging Pathogen Coxiella burnetii

机译：当小组失败时；根源新兴病原菌柯氏杆菌的系统生物学
- 作者：Talima Pearson;Heidie M. Hornstra;Jason W. Sahl;Sarah Schaack;James M. Schupp;Stephen M. Beckstrom-Sternberg;Matthew W. ONeill;Rachael A. Priestley;Mia D. Champion;James S. Beckstrom-Sternberg;Gilbert J. Kersh;James E. Samuel;Robert F. Massung;Paul Keim
- 期刊名称：《Systematic Biology》
90.Inferring Phylogeny and Introgression using RADseq Data: An Example from Flowering Plants (Pedicularis: Orobanchaceae)

机译：使用RADseq数据推断系统发育和基因渗入：以开花植物为例（Pedicularis：Orobanchaceae）
- 作者：Deren A. R. Eaton;Richard H. Ree
- 期刊名称：《Systematic Biology》
91.A Semantic Model for Species Description Applied to the Ensign Wasps (Hymenoptera: Evaniidae) of New Caledonia

机译：用于新喀里多尼亚少尉黄蜂（膜翅目：Evaniidae）的物种描述语义模型
- 作者：James P. Balhoff;István Mikó;Matthew J. Yoder;Patricia L. Mullins;Andrew R. Deans
- 期刊名称：《Systematic Biology》
92.Next-Generation Museomics Disentangles One of the Largest Primate Radiations

机译：下一代Museomics可以解开最大的灵长类动物辐射之一
- 作者：Katerina Guschanski;Johannes Krause;Susanna Sawyer;Luis M. Valente;Sebastian Bailey;Knut Finstermeier;Richard Sabin;Emmanuel Gilissen;Gontran Sonet;Zoltán T. Nagy;Georges Lenglet;Frieder Mayer;Vincent Savolainen
- 期刊名称：《Systematic Biology》
93.A Branch-Heterogeneous Model of Protein Evolution for Efficient Inference of Ancestral Sequences

机译：有效进化祖先序列的蛋白质进化的分支异构模型
- 作者：M. Groussin;B. Boussau;M. Gouy
- 期刊名称：《Systematic Biology》
94.The Tree of Life

机译：生命之树
- 作者：David R. Maddison
- 期刊名称：《Systematic Biology》
95.Phylogenetic Analysis Using Lévy Processes: Finding Jumps in the Evolution of Continuous Traits

机译：使用Lévy过程的系统发育分析：发现连续性状进化中的跃迁
- 作者：Michael J. Landis;Joshua G. Schraiber;Mason Liang
- 期刊名称：《Systematic Biology》
96.Pruning Rogue Taxa Improves Phylogenetic Accuracy: An Efficient Algorithm and Webservice

机译：修剪流氓分类单元可提高系统发育的准确性：一种有效的算法和Web服务
- 作者：Andre J. Aberer;Denis Krompass;Alexandros Stamatakis
- 期刊名称：《Systematic Biology》
- Bootstrap support consensus tree phylogenetic postanalysis rogue taxa software webservice;
97.An Extreme Case of Plant–Insect Codiversification: Figs and Fig-Pollinating Wasps

机译：植物-昆虫共生的极端案例：无花果和无花果黄蜂
- 作者：Astrid Cruaud;Nina Rønsted;Bhanumas Chantarasuwan;Lien Siang Chou;Wendy L. Clement;Arnaud Couloux;Benjamin Cousins;Gwenaëlle Genson;Rhett D. Harrison;Paul E. Hanson;Martine Hossaert-Mckey;Roula Jabbour-Zahab;Emmanuelle Jousselin;Carole Kerdelhué;Finn Kjellberg;Carlos Lopez-Vaamonde;John Peebles;Yan-Qiong Peng;Rodrigo Augusto Santinelo Pereira;Tselil Schramm;Rosichon Ubaidillah;Simon van Noort;George D. Weiblen;Da-Rong Yang;Anak Yodpinyanee;Ran Libeskind-Hadas;James M. Cook;Jean-Yves Rasplus;Vincent Savolainen
- 期刊名称：《Systematic Biology》
98.A Total-Evidence Approach to Dating with Fossils Applied to the Early Radiation of the Hymenoptera

机译：化石约会的全证据方法应用于膜翅目的早期辐射
- 作者：Fredrik Ronquist;Seraina Klopfstein;Lars Vilhelmsen;Susanne Schulmeister;Debra L. Murray;Alexandr P. Rasnitsyn
- 期刊名称：《Systematic Biology》
99.Fitting Nonstationary General-Time-Reversible Models to Obtain Edge-Lengths and Frequencies for the Barry–Hartigan Model

机译：拟合非平稳通用时间可逆模型以获取Barry–Hartigan模型的边长和频率
- 作者：Liwen Zou;Edward Susko;Chris Field;Andrew J. Roger
- 期刊名称：《Systematic Biology》
- Average substitutions BH model identifiability nonstationary NSGTR model;
100.Systematics Agenda 2020: The Mission Evolves

机译：2020年系统学议程：任务不断发展
- 作者：Marymegan Daly;Patrick S. Herendeen;Robert P. Guralnick;Mark W. Westneat;Lucinda McDade
- 期刊名称：《Systematic Biology》