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Analysis of genetic variability of Fasciola hepatica populations from different geographical locations by ISSR-PCR

机译:利用ISSR-PCR分析不同地理位置的Fasciola hepatica种群的遗传变异

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摘要

Inter-simple sequence repeats markers were used to determinate the genetic variability of Fasciola hepatica populations recovered from sheep and cattle from Spain (Sp1, Sp2, Sp3 and Sp4), UK (Eng), Ireland (Ir) and Mexico (Mex). Twenty five primers were tested but only five produced 39 reproducible bands, being 7179% polymorphic bands. This percentage ranged from 1026% in Sp4 to 4872% in Sp1, and per host between 2821 and 4872% in sheep and between 1026 and 3846% in cattle. This relatively low range of genetic diversity within populations, with a mean of 3440%, implies that a large proportion of variation resided among populations. The population differentiation (Gst = 0547) indicated that 547% of variation is due to differences between populations and 453% due to differences within population. The Nei's distance ranged between 0091 and 0230 in sheep and between 0150 and 0337 in cattle. The genetic relationships between populations and individuals were shown by a UPGMA dendrogram and a principal coordinate analysis; both grouped all populations separately from Sp4, a population of from the Midwest of Spain with the lowest level of diversity. Small genetic distances were observed between Eng and Ir, on the one hand, and Sp1, Sp2, Sp3, from the Northwest of Spain, together with Mex, on the other.
机译:简单序列间重复标记用于确定从西班牙(Sp1,Sp2,Sp3和Sp4),英国(Eng),爱尔兰(Ir)和墨西哥(Mex)的绵羊和牛中回收的Fasciola hepatica种群的遗传变异性。测试了25条引物,但只有5条产生了39条可再现条带,即7179%多态性条带。该百分比范围从Sp4的1026%到Sp1的4872%,绵羊的每主机介于2821和4872%之间,牛的每主机介于1026和3846%之间。种群中遗传多样性的这种相对较低的范围,平均为3440%,这意味着种群之间存在很大比例的变异。种群分化(Gst = 0547)表明,变异的547%是由于种群之间的差异,而453%是由于种群内部的差异。 Nei的距离在绵羊中介于0091至0230之间,在牛中介于0150至0337之间。 UPGMA树状图和主坐标分析显示了种群与个体之间的遗传关系。两者都将所有人口与Sp4分开,而Sp4是西班牙中西部的人口,其多样性水平最低。一方面,在Eng和Ir之间观察到较小的遗传距离,另一方面,来自西班牙西北部的Sp1,Sp2,Sp3与Mex一起观察到了遗传距离。

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