首页> 外文期刊>Molecular phylogenetics and evolution >Molecular systematics of the gonorynchiform fishes (Teleostei) based on whole mitogenome sequences: Implications for higher-level relationships within the Otocephala
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Molecular systematics of the gonorynchiform fishes (Teleostei) based on whole mitogenome sequences: Implications for higher-level relationships within the Otocephala

机译:基于完整的有丝分裂基因组序列的淋病型鱼类(Teleostei)的分子系统学:对耳脑内更高级别关系的暗示

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Although the order Gonorynchiformes includes only 31 species assigned to seven genera and four families. it exhibits a large variety of anatomical structures, making difficult the reconstruction of phylogenetic relationships among its representatives. Within the basal teleosts, the Gonorynchiformes belong to the Otocephala where they have been alternatively placed as the sister group of the Otophysi and of the Clupeiformes. In this context, we investigated the phylogeny of the Gonorynchiformes using whole mitogenome sequences from 40 species (six being newly determined for this study). Our taxonomic sampling included at least one species of each gonorynchiform genus and of each other major otocephalan lineage. Unambiguously aligned, concatenated mitogenomic sequences (excluding the ND6 gene and control region) were divided into five partitions (1st, 2nd, and 3rd codon positions, tRNA genes, and rRNA genes) and partitioned Bayesian analyses were conducted. The resultant phylogenctic trees were fully resolved, with most of the nodes well supported by the high posterior probabilities. As expected, the Otocephala were recovered as monophyletic. Within this group, the mitogenome data supported the monophyly of Alepocephaloidei, Gonorynchiformes, Otophysi, and Clupeiformes. The Gonorynchiformes and the Otophysi formed a sister group, rending the Ostariophysi monophyletic. This result conflicts with previous mitogenomic phylogenetic studies, in which a sister relationship was found between Clupeiformes and Gonorynchiformes. We discussed the possible causes of this incongruence. Within the Gonorynchiformes, the following original topology was found: (Gonorynchus (Clianos (Phractolaemus (Cromeria (Grasseichthys (Kneria, Parakneria)))))). We confirmed that the paedomorphic species Cromeria nilotica and Grasseichthys gabonensis belong to the family Kneriidae; however, the two species together did not form a monophyletic group. This result challenges the value of reductive or absent characters as synapomorphies in this group. (c) 2005 Elsevier Inc. All rights reserved.
机译:尽管淋菌纲仅包括分配给七个属和四个科的31种。它表现出各种各样的解剖结构,使其代表之间的系统发育关系的重建变得困难。在基部硬骨动物中,淋巴虎目属于耳头畸形,在那里它们作为耳突和唇形目的姊妹群被放置。在这种情况下,我们使用来自40个物种的全有丝分裂基因组序列(六个是本研究中新确定的)来研究淋菌纲的系统发育。我们的生物分类学采样包括每个淋病型和每个主要的耳突类至少有一种。明确比对,连接的线粒体基因组序列(不包括ND6基因和控制区)分为五个分区(第一,第二和第三密码子位置,tRNA基因和rRNA基因),并进行了分区贝叶斯分析。所形成的系统发育树已完全分解,大多数结点均由高后验概率很好地支持。正如预期的那样,耳骨被恢复为单系统的。在该组中,有丝分裂基因组的数据支持了cephal头畸形,淋病形纲,耳形和斜形目的单性。淋病型和耳形目动物组成一个姊妹小组,使Ostariophysi单系化。该结果与以前的线粒体基因组学研究相矛盾,后者在钩形目和淋巴形目之间发现了姐妹关系。我们讨论了这种不一致的可能原因。在淋菌纲中,发现了以下原始拓扑:(G(Clianos(Phractolaemus(Cromeria(Grasseichthys(Kneria,Parakneria))))))。我们证实,古形态的Cromeria nilotica和Grasseichthys gabonensis属于Kneriidae科。然而,这两个物种并没有形成一个单系群。这个结果挑战了还原性或缺乏性状作为同型同形异型的价值。 (c)2005 Elsevier Inc.保留所有权利。

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