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首页> 外文期刊>Molecular phylogenetics and evolution >Additive polymorphisms and reticulation in an ITS phylogeny of thrifts (Armeria, Plumbaginaceae)
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Additive polymorphisms and reticulation in an ITS phylogeny of thrifts (Armeria, Plumbaginaceae)

机译:节俭(Armeria,铅皮科)ITS系统发育中的加性多态性和网状结构

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摘要

A parsimony analysis of 133 sequences of the nuclear ribosomal DNA ITS1 + 5.8S + ITS2 region from 71 taxa in Armeria was carried out. The presence of additive polymorphic sites (APS; occurring in 14 accessions) fits the reticulate scenario proposed in previous work for explaining the ITS pattern of variation on a much smaller scale and is based mainly on the geographical structure of the data, irrespective of taxonomic boundaries. Despite the relatively low bootstrap values and large polytomies, part of which are likely due to disruptive effects of reticulation and concerted evolution in these multicopy sequences, the ITS analysis has phylogenetic and biogeographic implications. APS detected in this study are consistent with hypothesized hybridization events, although biased concerted evolution, previously documented in the genus, needs to be invoked for specific cases and may be responsible for a possible "sink" effect in terminals from a large clade. The causes for sequences of the same species appearing in different clades (here termed transclade) are discussed.
机译:对来自Armeria 71个分类单元的133个核糖体DNA ITS1 + 5.8S + ITS2区域的序列进行了简约分析。加性多态性位点(APS;出现在14个入藏中)的存在符合先前工作中提出的网状场景,用于以较小的规模解释ITS变异模式,并且主要基于数据的地理结构,而与分类学边界无关。尽管bootstrap值相对较低且多态性很大,但部分可能是由于这些多拷贝序列中网状结构的破坏性影响和协调一致的进化所致,ITS分析仍具有系统发育和生物地理意义。本研究中检测到的APS与假设的杂交事件一致,尽管先前在属中记录的偏向一致的进化过程需要针对特定​​情况进行调用,并且可能对大型进化枝中的末端“沉没”效应负责。讨论了同一物种出现在不同进化枝中的原因(这里称为跨子进化)。

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