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Isolation and characterization of polymorphic microsatellite loci in Hemibarbus labeo (Cyprinidae) using PCR-based isolation of microsatellite arrays (PIMA)

机译:使用基于PCR的微卫星阵列分离(PIMA)分离和鉴定半翅目(Cyprinidae)中多态微卫星基因座

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摘要

A total of 10 polymorphic microsatellite loci from Hemibarbus labeo were isolated and characterized using an optimized protocol to construct a microsatellite-enriched genomic library. The analysis of variability was performed in 24 specimens of mainland China. The mean number of alleles across loci was 3.10 +/- 1.10 and the level of expected heterozygosity varied from 0.0417 to 0.7482. Frequencies of null alleles of the 10 loci are not significantly greater than zero. No linkage disequilibrium was detected between loci in either population. Five primer pairs cross-amplify the microsatellites in other species, indicating transportability of the markers within the family Cyprinidae.
机译:分离并鉴定了来自Hemibarbus labeo的10个多态性微卫星基因座,并使用优化方案对其进行了表征,以构建富含微卫星的基因组文库。在中国大陆的24个样本中进行了变异性分析。整个基因座的等位基因平均数为3.10 +/- 1.10,预期杂合度水平为0.0417至0.7482。 10个基因座的无效等位基因的频率不明显大于零。在两个人群中的基因座之间均未检测到连锁不平衡。五个引物对交叉扩增其他物种中的微卫星,表明标记在鲤科中的转运性。

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