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Bioinformatic prediction of the antigenic epitopes of recombinant ferritin of Echinococcus granulosus

机译:颗粒棘球E铁蛋白重组抗原表位的生物信息学预测

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Echinococcosis is a zoonotic parasitic disease affecting humans and other mammals, which is mainly caused Echinococcus at larval stages. It is predominantly endemic in Chinese pasture regions, including Xinjiang, Qinghai, Gansu and Ningxia. The aim of the present study was to predict the T- and B-combined epitopes of Echinococcus granulosus (Eg). ferritin, and to analyze its secondary structure using online software. Prediction of the T- and B-combined epitopes of Eg. ferritin was performed using IEDB, SYFPEITHI and LEPS software, which are used to identify common areas of T- and B-cells. The results of the present study identified several potential antigenic epitopes of Eg. ferritin, including seven B-cell antigen epitope amino acid sequences with high values: 8-16, 54-61, 70-75, 80-90, 103-109, 117-124 and 167-173; and four T-cell antigen epitope amino acid sequences with high values: 85-93, 105-113, 133-141 and 157-165. Furthermore, a combined epitope region comprising an 105-109 amino acid sequence was identified. In conclusion, using bioinformatic methods, the present study confirmed the existence of Eg. ferritin on four T-cell antigen epitopes, seven B-cell antigen epitopes, and one T- and B-combined epitope region. These findings provide significant information for further investigation of the antigenicity of Eg. ferritin and the development of highly efficient epitope vaccines.
机译:棘球co虫病是一种影响人和其他哺乳动物的人畜共患寄生虫病,主要是在幼虫期引起的棘球E虫病。它在新疆,青海,甘肃和宁夏等中国牧区主要流行。本研究的目的是预测细粒棘球oc(Eg)的T和B组合表位。铁蛋白,并使用在线软件分析其二级结构。 Eg的T和B结合表位的预测。铁蛋白是使用IEDB,SYFPEITHI和LEPS软件进行的,用于识别T细胞和B细胞的常见区域。本研究的结果确定了几个潜在的抗原表位。铁蛋白,包括七个具有高值的B细胞抗原表位氨基酸序列:8-16、54-61、70-75、80-90、103-109、117-124和167-173;高值的四个T细胞抗原表位氨基酸序列:85-93、105-113、133-141和157-165。此外,鉴定了包含105-109个氨基酸序列的组合表位区域。总之,使用生物信息学方法,本研究证实了Eg的存在。铁蛋白在四个T细胞抗原表位,七个B细胞抗原表位以及一个T和B组合表位区域上。这些发现为进一步研究Eg的抗原性提供了重要信息。铁蛋白和高效抗原决定簇疫苗的开发。

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