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首页> 外文期刊>Mitochondrial DNA, Part A >The complete mitochondrial genome of the navel orangeworm Amyelois transitella (Insecta: Lepidoptera: Pyralidae)
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The complete mitochondrial genome of the navel orangeworm Amyelois transitella (Insecta: Lepidoptera: Pyralidae)

机译:肚脐橙线虫Amyeloistranstransella(昆虫纲:鳞翅目:Pyralidae)的完整线粒体基因组

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The complete mitochondrial genome of the navel orangeworm Amyelois transitella (Insecta: Lepidoptera: Pyralidae) was assembled from lllumina sequencing reads (lllumina Inc., San Diego, CA). The genome is a double-stranded circular molecule of 15 205 bp, comprising 22 transfer RNAs (tRNAs), 13 protein-coding genes (PCGs), two ribosomal RNAs (rRNAs), and one control region. All PCGs are initiated with ATN codons, except for COXI with the putative CGA initiation codon. Six PCGs {COXI, COX2, CYTB, ND2, ND3, and ND4) harbor an incomplete termination codon T, while all the others are terminated with TAA {ATP6, ATP8, COX3, ND1, ND4, and ND6) or TAG {ND4L). The base composition is highly biased (37.9% A, 12.6% C, 7.8% G, and 41.7% T) with an overall A + T content of 79.6%. Phylogenetic analysis indicated that A. transitella is more phylogenetically related to its confamilial counterparts than to those from the family Crabidae.
机译:从lllumina测序读段(lllumina Inc.,San Diego,CA)装配脐橙蠕虫Amyeloistransportella(Insecta:鳞翅目:Pyralidae)的完整线粒体基因组。该基因组是15 205 bp的双链环状分子,包含22个转移RNA(tRNA),13个蛋白质编码基因(PCG),两个核糖体RNA(rRNA)和一个控制区。除带有假定的CGA起始密码子的COXI外,所有PCG均以ATN密码子起始。六个PCG(COXI,COX2,CYTB,ND2,ND3和ND4)带有不完整的终止密码子T,而所有其他PCG均以TAA(ATP6,ATP8,COX3,ND1,ND4和ND6)或TAG(ND4L)终止。基础成分高度偏向(37.9%A,12.6%C,7.8%G和41.7%T),总A + T含量为79.6%。系统发育分析表明,与其他亲缘种相比,A.transtransella与亲本的亲缘关系更大。

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