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Genome sequence and description of the heavy metal tolerant bacterium Lysinibacillus sphaericus strain OT4b.31

机译:耐重金属细菌Lysinibacillus sphaericus菌株OT4b.31的基因组序列和描述

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Lysinibacillus sphaericus strain OT4b.31 is a native Colombian strain having no larvicidal activity against Culex quinquefasciatus and is widely applied in the bioremediation of heavy-metal polluted environments. Strain OT4b.31 was placed between DNA homology groups III and IV. By gap-filling and alignment steps, we propose a 4,096,672 bp chromosomal scaffold. The whole genome (consisting of 4,856,302 bp long, 94 contigs and 4,846 predicted protein-coding sequences) revealed differences in comparison to the L. sphaericus C3-41 genome, such as syntenial relationships, prophages and putative mosquitocidal toxins. Sphaericolysin B354, the coleopteran toxin Sip1A and heavy metal resistance clusters from nik, ars, czc, cop, chr, czr and cad operons were identified. Lysinibacillus sphaericus OT4b.31 has applications not only in bioremediation efforts, but also in the biological control of agricultural pests.
机译:Lysinibacillus sphaericus 菌株 OT4b.31 是一种哥伦比亚本土菌株,对库蚊没有杀幼虫活性,广泛应用于重金属污染环境的生物修复。菌株 OT4b.31 位于 DNA 同源组 III 和 IV 之间。通过间隙填充和对齐步骤,我们提出了一个 4,096,672 bp 的染色体支架。全基因组(由 4,856,302 bp 长、94 个重叠群和 4,846 个预测的蛋白质编码序列组成)揭示了与 L. sphaericus C3-41 基因组相比的差异,例如同源关系、噬菌体和推定的杀蚊毒素。鉴定了鞘翅目毒素 Sip1A 和 nik、ars、czc、cop、chr、czr 和 cad 操纵子的重金属抗性簇。Lysinibacillus sphaericus OT4b.31不仅在生物修复工作中具有应用,而且在农业害虫的生物防治中也有应用。

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