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首页> 外文期刊>Methods: A Companion to Methods in Enzymology >Rapid and comprehensive 'shotgun' lipidome profiling of colorectal cancer cell derived exosomes
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Rapid and comprehensive 'shotgun' lipidome profiling of colorectal cancer cell derived exosomes

机译:大肠癌细胞衍生的外泌体的快速和全面的“ shot弹枪”脂质组分析

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摘要

There is an increasing recognition of the role that cancer cell derived exosomes play in intercellular signaling upon fusion or uptake with a target cell, including immune system evasion, tumor growth and metastasis. To date, however, although exosomal membrane and cargo lipids are expected to play a pivotal role in exosome biogenesis and secretion, as well as in fusion or uptake and target cell functional response, the detailed characterization of cancer cell derived exosome lipids across a range of different cancers has not yet been broadly explored. Here, a simple and straightforward lipidome analysis strategy consisting of optimized sample extraction and novel sample derivatization techniques, coupled with high-resolution 'shotgun' mass spectrometry and 'targeted' tandem mass spectrometry methods, is demonstrated for the rapid identification of >520 individual lipids in 36 lipid classes and sub classes from exosomes secreted by the colorectal cancer cell line, LIM1215. Relative quantification and comparison of exosome versus cellular lipid profiles reveals significant enrichment of certain lipid classes, as well as substantial lipid subclass remodeling and changes in abundance of individual lipids, including sphingolipids, sterol lipids, glycerolipids and glycerophospholipids, and particularly plasmalogen- and alkyl ether-containing glycerophospholipids. This analysis strategy therefore provides a platform for comprehensive lipidome profiling across a wide range of cancer cell or tissue derived exosomes, that will facilitate subsequent functional studies aimed at elucidating the role of specific cellular or exosome lipids in the onset and progression of colorectal cancer, or to identify specific lipid(s) that could serve as effective diagnostic or prognostic disease biomarkers. (C) 2015 Elsevier Inc. All rights reserved.
机译:人们越来越认识到癌细胞衍生的外泌体在与靶细胞融合或摄取后在细胞间信号传导中所起的作用,包括免疫系统逃避,肿瘤生长和转移。然而,迄今为止,尽管预计外泌体膜和货物脂质在外泌体生物发生和分泌以及融合或摄取以及靶细胞功能反应中起着关键作用,但癌细胞的外泌体脂质在以下范围内的详细表征尚未广泛探索各种癌症。在此,展示了一种简单直接的脂质组分析策略,该方法包括优化的样品提取和新颖的样品衍生化技术,以及高分辨率的“ shot弹枪”质谱和“目标”串联质谱方法,可快速鉴定> 520种以上的脂质结直肠癌细胞系LIM1215分泌的外泌体中有36种脂类和亚类。相对定量和比较外泌体和细胞脂质的分布情况,发现某些脂质类别显着富集,以及大量的脂质亚类重塑和单个脂质(包括鞘脂,固醇脂,甘油脂和甘油磷脂,尤其是缩醛磷脂和烷基醚脂)的丰度变化含甘油磷脂。因此,该分析策略为跨广泛的癌细胞或组织来源的外泌体的脂质组分析提供了一个平台,这将有助于后续的功能研究,旨在阐明特定细胞或外泌体脂质在结肠直肠癌的发生和发展中的作用,或者鉴定可以用作有效诊断或预后疾病生物标记物的特定脂质。 (C)2015 Elsevier Inc.保留所有权利。

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