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Development of expressed sequence tags from the Bay Scallop, Argopecten irradians irradians

机译:海湾扇贝(Argopecten irradians irradians)表达序列标签的开发

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The bay scallop, Argopecten irradians irradians, introduced from North America, has become one of the most important aquaculture species in China. Inan effort to identify scallop genes involved in host defense, a high-quality cDNA library was constructed from whole body tissues of the bay scallop. A total of 5828 successful sequencing reactions yielded 4995 expressed sequence tags (ESTs) longer than 100 bp. Cluster and assembly analyses of the ESTs identified 637 contigs (consisting of 2853 sequences) and 2142 singletons, totaling 2779 unique sequences. Basic Local Alignment Search Tool (BLAST) analysis showed that the majority (73%) of the unique sequences had no significant homology (E-value
机译:从北美引进的海湾扇贝(Argopecten irradians irradians)已成为中国最重要的水产养殖品种之一。为了确定参与宿主防御的扇贝基因,从海湾扇贝的全身组织中构建了高质量的cDNA文库。总共5828个成功的测序反应产生了超过100 bp的4995个表达的序列标签(EST)。 EST的聚类和组装分析确定了637个重叠群(由2853个序列组成)和2142个单例,共有2779个唯一序列。基本局部比对搜索工具(BLAST)分析表明,大多数独特序列(73%)与GenBank中的序列没有显着同源性(E值

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