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首页> 外文期刊>European Journal of Plant Pathology >Phylogenetic placement, DNA barcoding, morphology and evidence for the spreading of Entyloma cosmi, a species attacking Cosmos bipinnatus in temperate climate gardens
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Phylogenetic placement, DNA barcoding, morphology and evidence for the spreading of Entyloma cosmi, a species attacking Cosmos bipinnatus in temperate climate gardens

机译:系统发育的位置,DNA条形码,形态学和Entyloma cosmi(一种在温带气候花园中袭击Cosmos bipinnatus的物种)传播的证据

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摘要

The white leaf smut is one of the recently reported and apparently spreading diseases of the garden cosmos (Cosmos bipinnatus) causing necrosis and wilting of the leaves and leading to reduction of its ornamental value. The occurrence of this fungal disease was first observed in Japan (Hokkaido Island) in 1996, and later in Germany (Saxony-Anhalt) in 2002, and the causative agent was described as new species, Entyloma cosmi, in 2005. This smut was subsequently reported from Canada, Switzerland, andKorea. Here it is reported for the first time from Austria, France, Italy, Poland, and Slovenia. This indicates the rapid spread of Entyloma cosmi on Cosmus bipinnatus in temperate climate gardens. The phylogenetic position of Entyloma cosmi is analyzed using ITS rDNA sequences, the phenotypic characters are critically re-evaluated, and the species is characterized using the Consolidated Species Concept, including morphology, ecology (host plant), and rDNA sequences (ITS and LSU). Selected ITS sequences and one LSU sequence generated in this work are deposited on the BarCode of Life website in GenBank (www. ncbi. nlm. nih. gov/ genbank/barcode/) and Fungal Barcoding Database (www. fungalbarcoding. org), and could serve as DNA barcodes to facilitate rapid identification of this economically important species. The ITS sequence from the holotype of Entyloma cosmi, sequenced here, is recommended to be deposited in the RefSeq Targeted Loci database.
机译:白叶黑穗病是最近报道的且明显传播的花园波斯菊(Cosmos bipinnatus)疾病之一,引起叶片坏死和枯萎并导致其观赏价值降低。这种真菌病的发生最早是在1996年在日本(北海道岛)观察到的,随后在2002年在德国(萨克森-安哈尔特州)观察到的,该病原体在2005年被描述为新种Entyloma cosmi。来自加拿大,瑞士和韩国的报道。这是奥地利,法国,意大利,波兰和斯洛文尼亚的首次报道。这表明,在温带气候花园中,Cosmi Entyloma cosmi在Cosmus bipinnatus上迅速传播。使用ITS rDNA序列分析Entyloma cosmi的系统发育位置,重新评估表型特征,并使用综合物种概念对物种进行特征化,包括形态,生态学(宿主植物)和rDNA序列(ITS和LSU) 。这项工作中产生的选定ITS序列和一个LSU序列存放在GenBank上的生命条码网站(www.ncbi.nlm.nih.gov/genbank/barcode/)和真菌条形码数据库(www.fungalbarcoding.org)中,以及可以用作DNA条形码,以帮助快速识别这种具有经济意义的物种。建议将此处来自Entyloma cosmi完整型的ITS序列(在此测序)存放在RefSeq靶向基因库数据库中。

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