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From genome to wheat: emerging opportunities for modelling wheat growth and development.

机译:从基因组到小麦:为小麦生长和发育建模的新兴机会。

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摘要

Ecophysiological models of crop growth and development sometimes show unrealistic responses that are attributable to our incomplete understanding of the processes the models attempt to describe. Rapid advances in plant genetics, genomics and biochemistry offer important opportunities for improving representations of key processes of growth and development. Research on incorporation of genetic information in models supports this potential, especially in modelling cultivar performance across environments. This paper reviews progress in using information from genetics, genomics and allied fields in modelling and examines approaches suitable for modelling wheat (Triticum aestivum L. and T. durum Desf.). Efforts to model wheat crops should first focus on the relatively well-understood genetic systems affecting phenology and plant height. A simple gene-based approach using linear equations to estimate cultivar-specific parameters has the advantage that it can easily be implemented in existing wheat models. One requirement is to integrate data on the genetic makeup of wheat cultivars with results from field trials that can be used to estimate genetic effects and evaluate model performance. Concomitantly, modellers should exploit findings from genomics and allied fields on wheat and other plant species in order to improve sub-models of individual processes, using more complex representations of gene action. Advances in these more mechanistic representations require much more detailed and quantitative studies on how gene action varies with specific environmental signals such as temperature and photoperiod..
机译:作物生长和发育的生态生理模型有时表现出不切实际的反应,这归因于我们对模型试图描述的过程的不完全了解。植物遗传学,基因组学和生物化学的飞速发展为改善生长和发育关键过程的代表性提供了重要的机会。将遗传信息纳入模型的研究支持了这种潜力,尤其是在跨环境的品种表现模型中。本文回顾了使用遗传学,基因组学和相关领域的信息进行建模的进展,并研究了适用于建模小麦的方法(Triticum aestivum L.和T. durum Desf。)。模拟小麦作物的工作应首先关注影响物候和株高的相对容易理解的遗传系统。一种简单的基于基因的方法,使用线性方程式估算特定品种的参数,具有可以在现有小麦模型中轻松实现的优势。一项要求是将有关小麦品种遗传组成的数据与田间试验的结果相结合,这些结果可用于估计遗传效应和评估模型性能。伴随地,建模者应该利用来自小麦和其他植物物种的基因组学和相关领域的发现,以便使用更复杂的基因作用表示来改进单个过程的子模型。这些更机械的表示方法的进步要求对基因作用如何随特定环境信号(例如温度和光周期)变化的方式进行更详细和定量的研究。

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