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StAMP encoding the antigenic membrane protein of stolbur phytoplasma is useful for molecular epidemiology

机译:编码Stolbur植原体抗原膜蛋白的StAMP可用于分子流行病学

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摘要

The antigenic membrane protein of stolbur phytoplasma has been cloned and characterized. The expression of StAMP in Escherichia coli produced a 16 kDa peptide recognized by an anti-stolbur monoclonal antibody. Stamp is submitted to a positive diversifying selection pressure (Fabre et al., 2011). The genetic diversity of stamp was evaluated among a collection of stolbur phytoplasma strains representative of the tuf and secY genetic diversity of stolbur phytoplasmas in the Euro-Mediterranean basin. Most of the French, Italian and Croatian strains clustered on the same phylogenetic branch (tuf-type b cluster I). A second branch of the phylogenetic tree corresponded to strains of central and Eastern Europe (tuf-type b cluster II), while a third branch grouped strains of the east of the Mediterranean basin (Greece, Serbia, Lebanon, and Azerbaijan). Strains of the tuf-type a genotype clustered together in an independent monophyletic branch of the stamp phylogenetic tree. In conclusion, stamp variability seems to be correlated to geographical origin in the case of the tuf-type b strains.
机译:已经克隆和鉴定了茎生菜质体的抗原膜蛋白。 StAMP在大肠杆菌中的表达产生了一个16 kDa的肽,被抗stolbur单克隆抗体识别。邮票面临着多元化的正选择压力(Fabre等,2011)。在代表欧洲地中海盆地的stolbur phytoplasma的tuf和secY遗传多样性的一组stolbur phytoplasma菌株中评估了stamp的遗传多样性。大多数法国,意大利和克罗地亚菌株都聚集在同一系统发育分支上(tuf型b簇I)。系统发育树的第二个分支对应于中欧和东欧的菌株(tuf型b簇II),而第三个分支将地中海盆地东部的菌株(希腊,塞尔维亚,黎巴嫩和阿塞拜疆)分组。 Tuf型a基因型的菌株聚集在邮票系统发生树的独立单系分支中。总之,在tuf型b株的情况下,图章变异性似乎与地理起源相关。

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