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首页> 外文期刊>Ecological Modelling >Estimating optimal complexity for ecological niche models: A jackknife approach for species with small sample sizes
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Estimating optimal complexity for ecological niche models: A jackknife approach for species with small sample sizes

机译:估算生态位模型的最佳复杂度:小样本物种的折刀方法

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摘要

Algorithms for producing ecological niche models and species distribution models are widely applied in biogeography and conservation biology. However, in some cases models produced by these algorithms may not represent optimal levels of complexity and, hence, likely either overestimate or underestimate the species' ecological tolerances. Here, we evaluate a delete-one jackknife approach for tuning model settings to approximate optimal model complexity and enhance predictions for datasets with few (here, <10) occurrence records. We apply this approach to tune two settings that regulate model complexity (feature class and regularization multiplier) in the presence-background modeling program Maxent for two species of spiny pocket mice in Ecuador and southwestern Colombia. For these datasets, we identified an optimal feature class parameter that is more complex than the default. Highly complex features are not typically recommended for use with small sample sizes in Maxent. However, when coupled with higher regularization, complex features (that allow more flexible responses to environmental variables) can obtain models that out-perform those built using default settings (employing less complex feature classes). Although small sample sizes remain a serious limitation to model building, this jackknife optimization approach can be used for species with few localities (
机译:产生生态位模型和物种分布模型的算法已广泛应用于生物地理学和保护生物学。但是,在某些情况下,由这些算法生成的模型可能无法代表最佳的复杂性水平,因此可能高估或低估了物种的生态容忍度。在这里,我们评估了一种删除刀折刀的方法,用于调整模型设置,以逼近最佳模型复杂度,并增强对出现次数很少(此处为<10)的数据集的预测。在厄瓜多尔和哥伦比亚西南部的两种棘手型口袋鼠的存在背景建模程序Maxent中,我们采用这种方法来调整调节模型复杂度的两个设置(特征类和正则化乘数)。对于这些数据集,我们确定了比默认要素复杂的最佳要素类参数。在Maxent中,通常不建议将高度复杂的功能用于小样本量。但是,当结合更高的正则化功能时,复杂的要素(允许对环境变量进行更灵活的响应)可以获得比使用默认设置(使用不太复杂的要素类)构建的模型更好的模型。尽管小样本量仍然严重限制了模型的建立,但这种折刀优化方法可用于位置不多(<约20至25)的物种,以产生可最大限度利用少量信息的模型。

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