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Simple and efficient algorithm for large scale molecular dynamics simulation in hard disk system

机译:硬盘系统中大规模分子动力学模拟的简单高效算法

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摘要

A simple and efficient algorithm of the molecular-simulation of the hard disk system based on the Event-Driven method is developed. From the analysis of algorithm, the complexity is #rho#(log N) per 1 event, and the constant coefficient of the complexity is smaller than conventional efficient algorithm based on the concept of Cell-Crossing Event. The maximum performance of more than 460 millions of collisions per CPU-hour on the Alpha600 compatible in a 2500 particle system is achieved. An extension to the infinite-space system based on this algorithm is also proposed.
机译:提出了一种基于事件驱动方法的简单高效的硬盘分子模拟算法。从算法的分析来看,复杂度为每1个事件#rho#(log N),并且复杂度的常数系数小于基于“单元交叉事件”概念的常规高效算法。在2500个粒子系统中兼容的Alpha600上,每个CPU小时可获得超过4.6亿个碰撞的最大性能。还提出了对基于该算法的无限空间系统的扩展。

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