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Assignment of genotypes to populations and assessment of genetic diversity of Tecomella undulata trees of Rajasthan (India) using ISSR markers

机译:使用ISSR标记将拉贾斯坦邦(印度)的Tecomella undulata树的基因型分配给种群并评估其遗传多样性

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© 2021, Society for Plant Research.Tecomella undulata (Sm.) Seem (Bignoniaceae) is an important timber yielding tree species of arid region. It is one of the most dwindling species of Rajasthan (India) which is represented by its fragmented populations. Its population is drastically reduced due its over-exploitation for wood and medicinal use. Knowledge of the natural genetic variation and population structure is an important step for developing an appropriate conservation strategy for the species. For the present study, population structure of the species was investigated using ISSR markers by taking 120 individuals from 12 populations covering the potential pockets of arid state of Rajasthan. The sampled populations harbored high level of genetic diversity as assessed through ISSR markers (H = 0.1646, I = 0.2790) that was partitioned more within the populations (58) than in between the populations (42). The results of STRUCTURE and split decomposition analysis revealed the existence of two admixed genetic pools of the species in Rajasthan. The pairwise Nei’s gene distance among the populations demonstrated a narrow range from 0.0028 to 0.213. The isolation by distance analysis carried out through the Mantel test demonstrated that the species witnessed a weak correlation (r2 = 0.010, P = 0.170) among the genetic and geographic distance. Our results suggest that the narrowly distributed Tecomella undulata populations in Rajasthan demonstrated high genetic diversity within the populations, however overall population structure is weak.
机译:© 2021, Society for Plant Research.紫薇科(Sm.) Seem (Bignoniaceae)是干旱地区重要的木材生产树种。它是拉贾斯坦邦(印度)最减少的物种之一,其特点是种群分散。由于木材和药用的过度开发,其人口急剧减少。了解自然遗传变异和种群结构是为该物种制定适当保护策略的重要一步。在本研究中,使用 ISSR 标记研究了该物种的种群结构,从 12 个种群中采集了 120 个个体,覆盖了干旱的拉贾斯坦邦的潜在口袋。通过ISSR标记(H = 0.1646,I = 0.2790)评估,抽样种群具有高水平的遗传多样性,种群内(58%)的分配比种群之间的分配(42%)更多。STRUCTURE和分裂分解分析结果显示,拉贾斯坦邦存在两个混合基因库。群体间Nei's基因距离的成对距离范围从0.0028到0.213。通过Mantel检验进行的距离隔离分析表明,该物种在遗传距离和地理距离之间具有较弱的相关性(r2 = 0.010,P = 0.170)。结果表明,拉贾斯坦邦狭窄分布的Tecomella undulata种群在种群内表现出较高的遗传多样性,但总体种群结构较弱。

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