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A TaqMan real-time PCR assay for survey of white spot syndrome virus (WSSV) infections in Litopenaeus vannamei postlarvae and shrimp of farms in different grow-out seasons

机译:TaqMan实时荧光定量PCR分析法用于调查不同生长季节的凡纳滨对虾幼虾和虾中白斑综合症病毒(WSSV)感染

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摘要

A TaqMan real-time PCR was conducted to quantify the white spot syndrome virus (WSSV) infections of three Litopenaeus vannamei hatcheries and 30 commercial grow-out ponds from different farms, during summer and autumn in South Korea. A total of 98.89% postlarvae showed WSSV-positive with very low WSSV infection load, 0.0-34.3 (mean of 3.2) copiesg DNA, while all farm samples were WSSV-positive with a mean load of 9.8A-106 and 2.1A-105 copiesg DNA in summer and autumn, respectively. In summer, nine (52.9%) farms showed WSSV infections with fewer than 103 copiesg DNA and a mean shrimp production of 1.05mt/ha; meanwhile, eight (47.1%) farms showed high infections (i.e., >103 copiesg DNA) with a mean shrimp production of 0.85mt/ha. In autumn, a total of eight (61.5%) farms showed infections with fewer than 103 copiesg DNA, with mean shrimp production of 4.53mt/ha; five (38.5%) farms showed high infection (i.e., >103 copiesg DNA), with a mean shrimp production of 0.42mt/ha. The mean production of autumn farms with infection loads of less than 103 copiesg DNA, versus that of autumn farms with more than 103 copiesg DNA, was significantly different (P <0.05).
机译:在夏季和秋季,在韩国进行了TaqMan实时荧光定量PCR,定量了三个南美白对虾孵化场和来自不同农场的30个商业化养殖池的白斑综合症病毒(WSSV)感染。总共98.89%的幼虫显示WSSV阳性且WSSV感染负荷非常低,0.0-34.3(平均值为3.2)拷贝/ ng DNA,而所有农场样品均为WSSV阳性,平均负荷为9.8A-106和2.1A夏季和秋季分别为-105拷贝/ ng DNA。夏季,有9个(52.9%)养殖场显示出WSSV感染,DNA少于103拷贝/ ng,虾的平均产量为1.05mt / ha。同时,八个(47.1%)养殖场感染率很高(即> 103拷贝/ ng DNA),虾平均产量为0.85公吨/公顷。秋季,共有8个(61.5%)养殖场感染的DNA少于103拷贝/ ng,虾的平均产量为4.53mt / ha。 5个(38.5%)养殖场显示出高感染率(即> 103个拷贝/ ng DNA),平均虾产量为0.42公吨/公顷。感染负荷低于103拷贝/ ng DNA的秋季农场的平均产量与高于103拷贝/ ng DNA的秋季农场的平均产量有显着差异(P <0.05)。

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