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Weak carbohydrate-carbohydrate interactions in membrane adhesion are fuzzy and generic

机译:carbohydrate-carbohydrate交互疲软膜附着力是模糊和通用的

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Carbohydrates such as the trisaccharide motif Le(X)are key constituents of cell surfaces. Despite intense research, the interactions between carbohydrates of apposing cells or membranes are not well understood. In this article, we investigate carbohydrate-carbohydrate interactions in membrane adhesion as well as in solution with extensive atomistic molecular dynamics simulations that exceed the simulation times of previous studies by orders of magnitude. For Le(X), we obtain association constants of soluble carbohydrates, adhesion energies of lipid-anchored carbohydrates, and maximally sustained forces of carbohydrate complexes in membrane adhesion that are in good agreement with experimental results in the literature. Our simulations thus appear to provide a realistic, detailed picture of Le(X)-Le(X)interactions in solution and during membrane adhesion. In this picture, the Le(X)-Le(X)interactions are fuzzy,i.e.Le(X)pairs interact in a large variety of short-lived, bound conformations. For the synthetic tetrasaccharide Lac 2, which is composed of two lactose units, we observe similarly fuzzy interactions and obtain association constants of both soluble and lipid-anchored variants that are comparable to the corresponding association constants of Le(X). The fuzzy, weak carbohydrate-carbohydrate interactions quantified in our simulations thus appear to be a generic feature of small, neutral carbohydrates such as Le(X)and Lac 2.
机译:碳水化合物如三糖的主题勒(X)是细胞表面的关键成分。尽管激烈的研究、交互添碳水化合物之间的细胞或膜不清楚。篇文章中,我们调查carbohydrate-carbohydrate相互作用在膜附着力解决方案广泛的原子的分子动力学模拟超过模拟先前的研究的数量级。勒(X),我们获得协会常量可溶性碳水化合物,附着力的能量lipid-anchored碳水化合物,并最大限度持续的碳水化合物复合体膜的附着力良好的协议在文献中实验结果。因此似乎提供了一个现实的模拟,详细的照片勒(X)勒(X)的相互作用解决方案,并在膜附着力。照片,勒(X)勒(X)相互作用模糊,i.e.Le (X)对多种互动短暂的构象。合成四糖Lac 2 =两个乳糖单元组成的,我们观察同样模糊交互和获得协会的可溶性和常量lipid-anchored与变异相应的协会常量勒(X)。模糊,carbohydrate-carbohydrate疲软交互模拟从而量化小的似乎是一个通用的特性,中性的碳水化合物如勒(X)和虫胶2。

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