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Misidentification of Candida guilliermondii as C. famata among Strains Isolated from Blood Cultures by the VITEK 2 System

机译:VITEK 2系统从血液培养物中分离出的菌株中假丝酵母假丝酵母的错误鉴定

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Introduction. The aim of this study was to differentiate between Candida famata and Candida guilliermondii correctly by using matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) and gene sequencing. Methods. Twenty-eight Candida strains from blood cultures that had been identified as C. famata (N = 25), C. famata/C. guilliermondii (N = 2), and C. guilliermondii (N = 1) by the VITEK 2 system using the YST ID card were included. We identified these strains by MALDI-TOF MS and gene sequencing using the 28S rRNA and ITS genes and compared the results with those obtained by the VITEK 2 system. Results. All 28 isolates were finally identified as C. guilliermondii. Sequencing analysis of the 28S rRNA gene showed 99.80%-100% similarity with C. guilliermondii for all 28 strains. The ITS gene sequencing of the strains showed 98.34%-100% homology with C. guilliermondii. By MALDI-TOF, we could correctly identify 21 (75%) of 28 C. guilliermondii isolates. Conclusion. We should suspect misidentification when C. famata is reported by the VITEK 2 system, and we always should keep in mind the possibility of misidentification of any organism when an uncommon species is reported.
机译:介绍。这项研究的目的是通过使用基质辅助的激光解吸/电离飞行时间质谱(MALDI-TOF MS)和基因测序来正确区分假丝酵母和古德里假丝酵母。方法。来自血液培养物的二十八个念珠菌菌株被鉴定为C. famata(N = 25),C。famata / C。包括使用YST ID卡通过VITEK 2系统创建的guilliermondii(N = 2)和C. guilliermondii(N = 1)。我们通过MALDI-TOF MS鉴定了这些菌株,并使用28S rRNA和ITS基因进行了基因测序,并将结果与​​通过VITEK 2系统获得的结果进行了比较。结果。最后将所有28个分离株鉴定为gu.erilli ii。 28S rRNA基因的测序分析显示,对于所有28个菌株,它都与古氏梭状芽胞杆菌有99.80%-100%的相似性。菌株的ITS基因测序表明与古氏梭菌有98.34%-100%的同源性。通过MALDI-TOF,我们可以正确地鉴定出28株古氏梭状芽胞杆菌中的21株(75%)。结论。当通过VITEK 2系统报告法氏梭状芽胞杆菌时,我们应该怀疑误认,并且当报道一种罕见物种时,我们应始终牢记对任何生物体进行误认的可能性。

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