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Identification of DDX58 and CXCL10 as Potential Biomarkers in Acute Respiratory Distress Syndrome

机译:DDX58和CXCL10鉴定急性呼吸窘迫综合征中的潜在生物标志物

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摘要

Acute respiratory distress syndrome (ARDS) is a devastating condition of acute inflammatory lung injury and causes high morbidity and mortality. Therefore, investigations on the effective biomarkers will be significant for the understanding of ARDS. In our research, the gene expression profiles of 27 samples from ARDS patients (n?=?18) and healthy controls (n?=?9) were analyzed and eight gene co-expression modules were identified by constructing weighted gene co-expression network. The correlation analysis of modules with phenotypes showed that genes in the yellow and black modules, which were significantly enriched in the ARDS-related pathways, such as TNF signaling pathway, Toll-like receptor signaling pathway, and NF-kappa B signaling pathway, were associated with the phenotype “time postinfection.” Genes DDX58 and CXCL10, which were highly expressed after infection and significantly enriched in ARDS-related pathways, presented high score in protein–protein interaction analysis, indicating that they may be associated with ARDS and providing novel biomarkers for its diagnosis, treatment, and surveillance.
机译:急性呼吸窘迫综合征(ARDS)是一种急性炎症肺损伤的破坏性条件,并导致高发病率和死亡率。因此,对有效生物标志物的调查对于理解ARDS将是重要的。在我们的研究中,分析了来自ARDS患者的27个样品的基因表达谱(n?= 18)和健康对照(n?=β9),并通过构建加权基因共表达网络来鉴定8个基因共表达模块。具有表型的模块的相关性分析显示黄色和黑色模块中的基因,这些基因在ards相关途径中显着富集,例如TNF信号传导途径,收费的受体信号传导途径和NF-Kappa信号传导途径。与表型“时间发布的时间”相关联。在感染后高度表达并显着富集在与ARDS相关的途径中高度表达的基因DDX58和CXCL10在蛋白质 - 蛋白质相互作用分析中提高了高分,表明它们可能与ARDS相关,并为其诊断,治疗和监测提供新的生物标志物。

著录项

  • 来源
    《DNA and Cell Biology》 |2019年第12期|共8页
  • 作者单位

    Department of Critical Care Medicine Lianyungang Clinical College of Nanjing Medical University;

    Department of Critical Care Medicine Lianyungang Clinical College of Nanjing Medical University;

    Department of Emergency Medicine Lianyungang Clinical College of Nanjing Medical University;

    Department of Critical Care Medicine Lianyungang Clinical College of Nanjing Medical University;

    Department of Critical Care Medicine Lianyungang Clinical College of Nanjing Medical University;

    Department of Critical Care Medicine Lianyungang Clinical College of Nanjing Medical University;

    Department of Emergency Medicine Lianyungang Clinical College of Nanjing Medical University;

  • 收录信息
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 细胞遗传学;细胞生物学;
  • 关键词

    acute respiratory distress syndrome; weighted gene co-expression network; DDX58; CXCL10; biomarker;

    机译:急性呼吸窘迫综合征;加权基因共表达网络;DDX58;CXCL10;生物标志物;

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