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Identification of MMP1 as a Potential Prognostic Biomarker and Correlating with Immune Infiltrates in Cervical Squamous Cell Carcinoma

机译:鉴定MMP1作为潜在的预后生物标志物,与宫颈鳞状细胞癌中免疫浸润的关联

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Cervical squamous cell carcinoma (CESC) is a human papillomavirus-driven tumor that the underlying molecular mechanisms are unclear. This study aimed to elucidate the key candidate genes and potential mechanism in CESC by bioinformatics analysis. A total of 132 common differentially expressed genes (DEGs) were identified based on three expression profile data sets. A multivariate Cox proportional regression model was used to develop a four-gene prognostic signature. Mechanistically, the correlationship between MMP1 and tumor-infiltrating lymphocytes was further analyzed. Furthermore, annotations were investigated by Gene Ontology (GO) and The Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses. Finally, potential drugs for CESC treatment were predicted by Connectivity Map. We profiled four genes (EFNA1, ANLN, MMP1, and ZWINT) with significant prognostic values for CESC. Multiple public available data sets were used for mRNA expression and prognostic characterization. Subsequently, GO and KEGG pathway analyses showed DEGs were mainly enriched in cell cycle, immunity, and metabolic-related pathway. We then conducted an integrated analysis of MMP1, and the expression of MMP1 showed significantly inverse association with the amount of CD8+ T cells, CD4+ T cells, and macrophages infiltration. Our findings suggest the four-gene signature may be associated with prognosis. We further revealed that MMP1 may be a novel biomarker for immunotherapy, and prognostic judgment of patients with cervical cancer.
机译:宫颈鳞状细胞癌(CESC)是一种人乳头瘤病毒驱动的肿瘤,其潜在的分子机制尚不清楚。本研究旨在通过生物信息学分析阐明CESC中的关键候选基因和潜在机制。总基于三种表达谱数据集鉴定了总共132个常见的差异表达基因(DEGS)。使用多元COX比例回归模型来开发四基因预后签名。机械地,进一步分析了MMP1和肿瘤浸润淋巴细胞之间的相关性。此外,通过基因本体学(GO)和基因和基因组(KEGG)途径分析的京都百科全书来研究注释。最后,通过连接图预测了CESC治疗的潜在药物。我们对CESC具有显着预后值的四种基因(EFNA1,ANLN,MMP1和ZWint)。多个公共可用数据集用于mRNA表达和预后表征。随后,GO和KEGG途径分析显示含量富集细胞周期,免疫力和代谢相关途径。然后我们进行了对MMP1的综合分析,MMP1的表达显示出与CD8 + T细胞,CD4 + T细胞和巨噬细胞浸润的量显着逆关联。我们的研究结果表明四个基因签名可能与预后有关。我们进一步透露,MMP1可以是用于免疫疗法的新型生物标志物,并且对宫颈癌患者的预后判断。

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