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Complete genome sequence of Erythrobacter seohaensis SW-135(T) sheds light on the ecological role of the genus Erythrobacter for phosphorus cycle in the marine environment

机译:完全基因组序列的ERERHOBACTERS SW-135(T)揭示了海洋环境中磷循环属的生态作用

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摘要

Erythrobacter seohaensis SW-135(T) was isolated from inter sediments collected from an intertidal zone of the Yellow Sea in Korea. The genome of E. seohaensis SW-135(T) was sequenced and comprised of one circular chromosome with the size of 2,942,673 bp and DNA G + C content of 61.7%. It was reported that E. seohaensis SW-135(T) was positive for alkaline phosphatase activity by enzymatic test. Genomic annotation indicated that the genome of E. seohaensis SW-135(T) had two alkaline phosphatase-encoding genes, phoD and phoX, which products can dephosphorylate phosphoesters to more bioavailable dissolved inorganic phosphorus for microorganisms in the phosphorus limited condition. Comparative genomic analysis of marine Erythrobacter strains revealed that phoD and phoX were widely distributed in these strains, indicating the genus Erythrobacter may play an important role in the marine phosphorus cycle. This study broadens our understandings about ecological roles of the genus Erythrobacter participating in the marine phosphorus cycle, which is rarely investigated previously.
机译:从韩国黄海的跨界区收集的间沉积物中分离出eryhrobacter seohaensis sw-135(t)。测序E.Seohaensis SW-135(T)的基因组并包含一个圆形染色体,大小为2,942,673bp和DNA g + C含量为61.7%。据报道,E.Seohaensis SW-135(T)通过酶检测为碱性磷酸酶活性为阳性。基因组注释表明E.Seohaensis SW-135(T)的基因组具有两种碱性磷酸酶编码基因,Phod和Phox,该磷酸盐和PHOX可以去磷酸化物磷酸盐磷酸盐磷酸盐磷酸盐磷酸盐以更加生物可利用的溶解无机磷,用于微生物中的微生物在磷有限条件下进行微生物。海洋红菌菌株的比较基因组分析显示,Phox和Phox广泛分布在这些菌株中,表明射出术属可能在海洋磷循环中发挥重要作用。本研究扩大了我们对参与海洋磷循环的生态作用的理解,这很少先前研究。

著录项

  • 来源
    《Marine genomics》 |2018年第2018期|共4页
  • 作者单位

    Zhejiang Sci Tech Univ Coll Life Sci Hangzhou Zhejiang Peoples R China;

    State Ocean Adm Inst Oceanog 2 Key Lab Marine Ecosyst &

    Biogeochem Hangzhou 310012 Zhejiang Peoples R China;

    State Ocean Adm Inst Oceanog 2 Key Lab Marine Ecosyst &

    Biogeochem Hangzhou 310012 Zhejiang Peoples R China;

    Zhejiang Sci Tech Univ Coll Life Sci Hangzhou Zhejiang Peoples R China;

    Zhejiang Sci Tech Univ Coll Life Sci Hangzhou Zhejiang Peoples R China;

    State Ocean Adm Inst Oceanog 2 Key Lab Marine Ecosyst &

    Biogeochem Hangzhou 310012 Zhejiang Peoples R China;

  • 收录信息
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 遗传学;
  • 关键词

    Erythrobacter; Marine environment; Phosphorus cycle; Alkaline phosphatase; phoD; phoX;

    机译:erythrobacter;海洋环境;磷循环;碱性磷酸酶;PHOD;PHOX;

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